Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1944 ATGGAGGCTCAGCTCCACGACCACACTGAAAGACCAAACCCCACTTCCACCACCACGCGGTTAAAGCTCTTCGGCTTCAGCGTCAACCACGAAGACCATGACATCGAGGATGCATCAGACTCGATCACCAAGGCCATCTCCCCGTCTGGATCGGCGGACTCAGGCGGTGACGGCGGCGAAGAAGGCGGCATAGCCGGTTTCGCTCCCTCATCCGGCGACCGGAAATACGAGTGCCAGTACTGCTGCCGAGAGTTCTCGAACTCGCAAGCTCTCGGAGGTCACCAGAACGCGCACAAGAAAGAGCGTCAACAGCTGAAGCGCGCTCAGTTGCAGGCCACTCGAAACCCCGCCGTTTCATTTGGTCGGAACCCGATCATCTCCGCCTTCGCTCCCCCACCGCACCTGCTGGCTCCGCCGGGGTCCGTGGTGGTCCCGGTGGCACATCCATCGTGGGTCTACATGCCGCCACGTGCTGCGCCTTCTCCCTTCCACGTGTCCGTTTCACACGGTTGCGTGTTCCCCTCGGCGAACAACAGCAGCAACAACGGTAATTTCAGTAGCTGTAACGGTGGTAGTGGTAACCATAGCATTATATCAAGTGCTAGATCTGCCGGTGCAGGGGTGCTACCATACACTAGCGGAGCAGGGGAAACCTCGCCCACATTGCGAACAATGAGCTCCCAAGTACAGGCCCTGGCCCACTACGGTAGGATTGATGGGCCTTCTTTGAGTAGGTTCTCCAAAGCGGATGAGGGGCCCAATCTTGATGATGGGTTAGGCTTGGACTTGCAGCTCGGCCTAGGCCCACCTTGA 813 0.5867 MEAQLHDHTERPNPTSTTTRLKLFGFSVNHEDHDIEDASDSITKAISPSGSADSGGDGGEEGGIAGFAPSSGDRKYECQYCCREFSNSQALGGHQNAHKKERQQLKRAQLQATRNPAVSFGRNPIISAFAPPPHLLAPPGSVVVPVAHPSWVYMPPRAAPSPFHVSVSHGCVFPSANNSSNNGNFSSCNGGSGNHSIISSARSAGAGVLPYTSGAGETSPTLRTMSSQVQALAHYGRIDGPSLSRFSKADEGPNLDDGLGLDLQLGLGPP* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1944 270 PANTHER ZINC FINGER PROTEIN GIS3 14 269 - -
Dod02g1944 270 MobiDBLite consensus disorder prediction 43 68 - -
Dod02g1944 270 SUPERFAMILY beta-beta-alpha zinc fingers 72 103 IPR036236 -
Dod02g1944 270 MobiDBLite consensus disorder prediction 242 261 - -
Dod02g1944 270 Gene3D Classic Zinc Finger 64 120 - -
Dod02g1944 270 PANTHER ZINC FINGER PROTEIN 5 14 269 IPR044299 GO:0010090
Dod02g1944 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Dod02g1944 270 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1944 Dod-Chr2 29527509 29528755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1944 16 269 C2H2 Transcription Factor Family AT1G68360 45.926 1.39e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1944 - - gmx:100811796 279.641