Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1928 ATGGCTTCTGCTAAGAAAGCAGCAAACCCAGCTGGTGGCAAAACTGCAAAAGCACGTGATAGCTTAGTAAGCAAGCGAGCACGCTGGTACTGTGCTGCAGACGACGCTTTCCTCTGCCAAGGTTGTGACTCTTCTGTTCACTCAGCCAACCCATTAGCACGTAGGCACGAACGAGTTCGCTTGAAAATGGCTTCGTGCAAGTCCTTCGACTGGGCTAAAAGGGAACTCAATTGTGCTCCATCGTGGCACAAAGGTTTCACCAAGAAAGCTCGAACACCTCGAAATGGGAAGCATTACGCCCCCGCCGCAACGGCTTCTAATGCAAAGAGCCCTTTCCATTTGGTACCTGAAGAGGGTTCAGACGATACCAATCCCCACGAAGAGAGTAAGGAGCAGCTTCTTTATAGGGTGCCCATACTCGAACCCTTTGCTGCTGAGCTATGCACAACTTCATCTTCTATGTCATCGTCACCTGTTGAGGTTGAAACCAAGTGCAGCAATGGAAGCGACAGCAGGGTTTTGCTGGGTTTTAACAATCACAGGGTGATACACGGCTTTCTCCCAATGGATATAGAACTTTCCGAGTTTGCAGCGGATGTTGAGAGCTTGCTTGGTATGGGGCTGGAGAATCAGTGCATGGGAATGGAGGAGTTGGGGTTGGTTGGTAACAAAGAGCAGGATTACTGTCTTGTGGGTGACGGGAAATTGAAGGTGAAAGAGGAGGAGAGACCAGAAGTTGCTGACGCTGCAACTTGCAAGGTGGAGGAAGATCACGTGGAGATGGAAAGAGAATCATTTGAGTTGAGCTTTGATTATGATGATGACGACTCTCCTGCAGGGTGTGAAGAGGTAGTGGTGGAGAAGGTTGCTTTGGAAATGACGGAAGATGCGAACAATGGTGGAGAGCTCAGAGAAGATAGTCAAGCAAAGAGGAAGATATTGTTGCAGTTAGATTATGAGGCAGTAATCACTGCCTGGGCAAGCCAAAAATCTCCTTGGACTACTGGCGATAAGCCAGACTTTGACATTGATCAATCCTGGCCTTACTGCATGGAGAGTTGTGAAATGTTGGAGCTTCACCAGCCTTATTGTGAATTTGGTGGATTGTTTGGGGGTCCTCCGGCAATGGCTGACGGGGGAAGAGAAGCGAGAGTGTCAAGGTATAGAGAAAAGCGACGGACAAGGTGGTTCTCGAAGAAAATAAGGTATGAGGTTCGAAAATTGAATGCAGAAAAGAGACCCAGAATGAAAGGGAGGTTTGTAAAGAGGGGTTCCTTTGCACCCCCACCGACATTTCCTTTGGTAGACAAATAA 1314 0.4825 MASAKKAANPAGGKTAKARDSLVSKRARWYCAADDAFLCQGCDSSVHSANPLARRHERVRLKMASCKSFDWAKRELNCAPSWHKGFTKKARTPRNGKHYAPAATASNAKSPFHLVPEEGSDDTNPHEESKEQLLYRVPILEPFAAELCTTSSSMSSSPVEVETKCSNGSDSRVLLGFNNHRVIHGFLPMDIELSEFAADVESLLGMGLENQCMGMEELGLVGNKEQDYCLVGDGKLKVKEEERPEVADAATCKVEEDHVEMERESFELSFDYDDDDSPAGCEEVVVEKVALEMTEDANNGGELREDSQAKRKILLQLDYEAVITAWASQKSPWTTGDKPDFDIDQSWPYCMESCEMLELHQPYCEFGGLFGGPPAMADGGREARVSRYREKRRTRWFSKKIRYEVRKLNAEKRPRMKGRFVKRGSFAPPPTFPLVDK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1928 437 MobiDBLite consensus disorder prediction 115 129 - -
Dod02g1928 437 Pfam CCT motif 381 423 IPR010402 GO:0005515
Dod02g1928 437 ProSiteProfiles CCT domain profile. 381 423 IPR010402 GO:0005515
Dod02g1928 437 CDD Bbox1_BBX-like 20 61 - -
Dod02g1928 437 MobiDBLite consensus disorder prediction 110 129 - -
Dod02g1928 437 SMART bboxneu5 19 61 IPR000315 GO:0008270
Dod02g1928 437 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 429 - -
Dod02g1928 437 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1928 Dod-Chr2 28625073 28626985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1928 5 423 C2C2-CO-like Transcription Factor Family AT1G25440 43.052 4.17e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Dod02g1928 CCT 3.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1928 - - lang:109339476 508.834