Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1899 ATGCAAACTCATCACTCTTTCTCCTACATATCCTCTTGTGGGAGTAGTGCCTTCTTGGATGCTGATGTGGGAGTTGTTGATGGTGATGAAGCCTCCATCTCCCTCTCTCTTGGCCCTCCAGGCCAACAACACAACAACCCAAAAGTCTCAACCTCAAACCACTCTCCCACACTGCACCATCGTCACCAACAGCAAAGCCCTACCTCTGATGGCCAGAGTGGTGTAACAGTTGCCCTCCATATTGGCCTTCCCTCCACCAACGCACCAGACAGCACCACTAGTCCTACAAGCAAACCTGATCATTTGGCTTCATCAGCTCCCATTCAGGGTCAGTACTGGATACCTTCTCCGGCCCAAATCCTCATTGGACCCACTCAGTTCTCTTGCACAGTCTGCAACAAGATGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAGTATAGGAGGGGACCTGAATCATTGAGAGGGGCAAAACCAGCTTCTTCAATGCTGAGGCTTCCCTGCTATTGCTGTGCGGAGGGTTGCAAGAACAACATAGACCACCCAAGGTCAAGGCCACTAAAGGACTTCAGGACCCTCCAAACACACTACAAGAGGAAGCATGGAGCCAAGCCATTCGGATGCAGGAAGTGCGGGAAGCCCTTTGCGGTTCGAGGGGATTGGAGGACGCACGAGAAGAATTGCGGGAAGCTCTGGTTCTGCATCTGTGGCTCGGATTTCAAGCACAAGAGGTCCCTCAAGGACCATGTCCGTGCCTTCGGTGATGGCCACGCTCCACACACCGTGGAGAGTTGTGATCAGTTCGTGGATGAAGAACTAGGTGAGGATGATGAGGAAGAGTTGGAAGACGAAGAAGAAGATGATGATAATAATAATAATAATAACAAAAGCAACAATGAAGGAGTATTCACTTTTAATTAA 939 0.4973 MQTHHSFSYISSCGSSAFLDADVGVVDGDEASISLSLGPPGQQHNNPKVSTSNHSPTLHHRHQQQSPTSDGQSGVTVALHIGLPSTNAPDSTTSPTSKPDHLASSAPIQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRRGPESLRGAKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQFVDEELGEDDEEELEDEEEDDDNNNNNNKSNNEGVFTFN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1899 312 PANTHER ZINC FINGER PROTEIN WIP6 1 303 - -
Dod02g1899 312 MobiDBLite consensus disorder prediction 278 296 - -
Dod02g1899 312 MobiDBLite consensus disorder prediction 278 312 - -
Dod02g1899 312 MobiDBLite consensus disorder prediction 85 104 - -
Dod02g1899 312 SUPERFAMILY beta-beta-alpha zinc fingers 123 148 IPR036236 -
Dod02g1899 312 MobiDBLite consensus disorder prediction 36 75 - -
Dod02g1899 312 MobiDBLite consensus disorder prediction 32 104 - -
Dod02g1899 312 ProSitePatterns Zinc finger C2H2 type domain signature. 129 149 IPR013087 -
Dod02g1899 312 SUPERFAMILY beta-beta-alpha zinc fingers 195 232 IPR036236 -
Dod02g1899 312 Gene3D Classic Zinc Finger 168 259 - -
Dod02g1899 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 127 154 IPR013087 -
Dod02g1899 312 PANTHER ZINC FINGER PROTEIN WIP2 1 303 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1899 Dod-Chr2 27268060 27269670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1899 28 268 C2H2 Transcription Factor Family AT1G13290 71.837 3.59e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g1899 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1899 - - aprc:113870355 481.485