Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1889 ATGGCCACTGTTGCCACTACAGGAATTGGAGTAGGAGTTACCAAGCTCCAAGCCCACAAACCTAAGCACAAGTCCCTGTTTCTTGGGCAGGGACTTAGAATCAGACACTCTATTGAGCCACAGTTCAATGCAGGATTCACCATCTCAAACCCAAAGTCCTCCCAGGTGTGTGCATTGGGAGGTCAATGGGTTGATGCAGTTCACAACCTCTTTGTGGGTGTTGGGGTTGGCCTTCCTTGCACTGTCATGGAGTGTGGGGATATGATATACAGGAGCACCCTTCCCAAGTCAAATGGCTTGACAATCACACCCCCTGGGGTGGTTCTGGCTTTGGGTGCTCTCTCTTACCTGTGGGCTACACCTGGTGTGGCACCTGGTTTCTTTGACATGTTTGTCCTTGCTTTTGTTGAAAGGTTGTTCAGACCCACTTACAGAAAGGATGATTTTATTCTGGGGAAGAAGTTGGGAGAGGGATCCTTTGGAGTGGTTTATAGAGTGACACTGGCCAACAAGCCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAAAAGGCTACAGAATACGGTGCTGTAGAAATTTGGATGAATGAGCGTGTACGAAGAGCCTGTGCAAACAGCTGTGCAGATTTTGTTTATGGTTTTCTCGAGAGCTCTTCGAAGAAAGCTCCAGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACGTTAGCTGACTTGATGCAGAGTAGAGATTTTCCATATAATGTTGAAACATTGCTTCTGGGTGAGGTCCAGGACTTGCCCAAGGGAGTGGAAAGAGAAAATAGAATAATTCAGACAATCATGAGGCAAGTCTTGTTTGCTTTGGATGGTCTTCACTCAACTGGTATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTCTCTGAAGGGTCTCGATTATTCAAAATCATTGATCTTGGAGCTGCTACAGACCTGCGAGTTGGCATCAACTATATTCCTAAGGAGTTTCTTTTGGACCCAAGATATGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCATCTGCACCCTCAGCTCCGGTTGCGACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTGCCTGACAGATTTGATATCTATAGTGCTGGTCTGATCTTTCTTCAAATGGCATTCCCCGGTATACGAACTGATAACAGCCTCATACAATTCAACCGTCAGTTAAAGAGGTGTGACTATGACTTGTTTGCATGGAGAAGAAATGTAGAGCCTCGAGGTGGCCCTGAACTTAGGAGGGGCTTTGAGCTGTTGGATTTAGATGGCGGAACAGGCTGGGAACTTCTGACATCAATGGTCAGATACAAGGCAAGGCAAAGGCTGAGTGCAAAAGCAGCGTTAGCTCATCCTTTCTTTGACAAAGAAGGTTTGTTGGGATTGTCTATCATGCAAAATCTGAGGCTGCAGCTCTTACGAGCGACTCAGCAGGATTACGGGGAAGCTGCCAAGTGGATTACTCAGCTGATGGCAAAGTCAGGGACAGAGAAGGATGGTGGATTTACTGAAGCTCAGCTCCTGGAAATGAGAGAAATTGAACCCAAGAAGAAGGCTAGTGCACAGAGAAATGCTCTAGCTTCAGCTCTTAAGCTTCAGAGGAAAATTATAAGAACCTTAAATGAGAGTATGGATGAGCTCAGCAGACGCAGGAAAAGCGTTTGGTGGAGCAGGTGGATCCCAAGAGAGGAATGA 1734 0.4631 MATVATTGIGVGVTKLQAHKPKHKSLFLGQGLRIRHSIEPQFNAGFTISNPKSSQVCALGGQWVDAVHNLFVGVGVGLPCTVMECGDMIYRSTLPKSNGLTITPPGVVLALGALSYLWATPGVAPGFFDMFVLAFVERLFRPTYRKDDFILGKKLGEGSFGVVYRVTLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADFVYGFLESSSKKAPEYWLIWRFEGDATLADLMQSRDFPYNVETLLLGEVQDLPKGVERENRIIQTIMRQVLFALDGLHSTGIVHRDIKPQNIIFSEGSRLFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGIRTDNSLIQFNRQLKRCDYDLFAWRRNVEPRGGPELRRGFELLDLDGGTGWELLTSMVRYKARQRLSAKAALAHPFFDKEGLLGLSIMQNLRLQLLRATQQDYGEAAKWITQLMAKSGTEKDGGFTEAQLLEMREIEPKKKASAQRNALASALKLQRKIIRTLNESMDELSRRRKSVWWSRWIPREE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1889 577 CDD STKc_SNT7_plant 153 467 - -
Dod02g1889 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Dod02g1889 577 Coils Coil 543 563 - -
Dod02g1889 577 Pfam Protein kinase domain 152 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1889 577 SMART serkin_6 149 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1889 577 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 15 577 IPR044803 GO:0004674|GO:0009579
Dod02g1889 577 ProSiteProfiles Protein kinase domain profile. 149 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1889 577 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Dod02g1889 577 SUPERFAMILY Protein kinase-like (PK-like) 134 469 IPR011009 -
Dod02g1889 577 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 15 577 - -
Dod02g1889 577 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Dod02g1889 577 ProSitePatterns Protein kinases ATP-binding region signature. 155 182 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1889 Dod-Chr2 26859427 26864390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1889 267 468 Core Cell Cycle Gene Families AT2G38620 30.986 2.07e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Dod02g1889 Pkinase 3.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1889 - - gmx:100778588 973.385