Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1868 ATGGTGGGTGGTAGAAGAAAGAAGCTGCATATGAGCAAGATCTACTCATTCGCGTGTGGGAGATCGTCATTGAAAGGGGATCAGCACTCAAGCATCGGAGGGCGTGGGTATTCAAGGGTGGTGTTCTGCAATGAGCCGGAGAGCTTGGAGGGTGGGATCAGGAACTACGCGGATAATGCTGTGAGGTCCACCAAGTATAACGTCGCCACTTTCTTGCCAAAGTCACTGTTTGAGCAGTTTAGGAGGGTGGCCAACTTCTATTTCTTGGTGACTGGCATCTTGGCATTCACCGAGCTTGCACCTTATCAAGCTGTCAGTGCCATCCTCCCTTTGATTATTGTTATTGGGGGAACTATGGTCAAAGAGGGTATTGAAGATTGGGGGAGGAAAAAGCAGGATATTGAGGTGAACGATAGAAGAGTTAAAGTGCATAAAGGGGATGGAACTTTTGAATACACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTTAAGGTAGAGAAGGATGAATTCTTCCCTGCAGACCTCTTACTGCTTTCATCCAGTTATGAGGAAGCAGTGTGCTACGTTGAGACCATGAACTTGGATGGTGAGACGAATTTGAAGTTGAAACAAGGCTTGGAAGTAACTTCTTCTTTACAAGACTCCAACTTCGGTGATTTTAAAGCTACAGTCAAATGTGAAGACCCAAATGCGAATCTGTATTCATTTGTTGGGACCATGGAGTTTGGGGAGCAAGTGTATACCCTTTCTCCTCAGCAGCTTCTTCTGAGAGATTCTAAACTTCGTAATACAGACTACGTATTCGGAGCTGTCATCTTCACTGGTCATGACACCAAGGTTATCCAAAATTCTGTCGACCCCCCGTCGAAGAGAAGCAAGATCGAGAAGAAGATGGATAAAGTTATCTACTTCTTGTTTTGCATTATATTTCTAATGGCGTCTGTTGGATCTATTATCTTTGGCATTGCAACTAAGGATGACTTAGATAATGGGGTGATGAAAAGATGGTATCTAAGACCAGATGATTCTACAATTTTCTTTGATCCTAAAAGAGCACCTGCAGCCGCTATCTTTCACTGTTTGACAGCCTTAATGTTATATGGATTTTTCATTCCCATCTCGTTGTATGTATCCATAGAAATTGTCAAAATCCTTCAGAGCATCTTCATTAATCGAGATATCCATATGTACTATGAAGAGGCAGACAAACCAGCCCGTGCCTGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATTCTTTCTGATAAAACTGGAACTCTGACCTGCAATTCAATGGAGTTCATCAAATGTTCCATTGCTGGGGTTGCTTATGGTCGTGGGATTACCGAGGTTGAGAGGGCCATGAATATAAGAAGTGGGTTGGGATCAGATGACATAAGGCAATCTCCTGATAGAAAGGCACCCATCAAAGGTTTTAATTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTAATGCAAATGTTATCCAGAAGTTTTTCCGCTTGTTGGCAATCTGTCATACAGCCATACCAGAAGTCAATGAAGACATAGGAAATGTCTCATACGAGGCTGAATCTCCAGATGAAGCAGCATTTGTCATTGCAGCGAGAGAAGTTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCAATGTACGAGTTGGATCCAGTTTCGGGGAGCAAGGTTGAAAGGACATACAAGCTTCTCAATGTGTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGCAAGATGAAGAAGGAAGGATTATGCTACTCTCTAAAGGTGCTGACAGTGTTATGTTTGAAAGACTTGCTAAGAATGGAAGAGAGTTTGAAGAGGAAACCATGGAACATGTGCATGAATATGCTGAGGCAGGTCTACGGACGCTGGTACTGGCATGGCGTGAACTTGATGAAGAAGAATACAAGGAGTTTGATGATAAATTTACTGAAGGAAAAAATTCAGTTACAGAAGACCGGGAAGCACTGATTGAGGAAGTAGCAGATAAGATTGAGAGGAATCTGATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTTCAAAATGGGGTACCTAATTGCATTGACAAACTTGCCCAAGCTGGAATTAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGATTTGCTTGTAGTTTACTTAGACAAGGAATGAAGCAGATTATAATACATTTGGAGACTCCAGAAATTCAAGCATTGGAGAAGGTTGGAGACAAGACAGCTATTGCCAAGGCTTCTAGCGAAAGTATCCACCATCAGATATCAGAAGGTGCTCAACAGCTTGCTGCCTCCAGGGGAACCTCTCAGCAGGCATTTGCTCTGATTATTGATGGAAAATCGCTTGCTTATGCTCTAGAGGATAATATGAAGAACATGTTTCTAGATTTGGCAGTTCGTTGTGCATCTGTTATTTGCTGCCGCTCTTCACCAAAGCAGAAGGCACTGGTCACCAGACTGGTCAAATCTGGAACTGGCAAAACTACACTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGAGTGGGAATCAGTGGCGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGATATTTGGAACGGCTACTTCTTGTACATGGACATTGGTGTTACAGGAGGATCTCATCAATGATATGCTATTTCTTCTACAAGAGTGTCGCATTTGGCTTCACACTGTTCTTATATGAGGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCACTGTATAATGTCTTCTTTTCATCACTTCCCGCGATTGCCCTTGGGGTCTTTGACCAGGATGTATCTGCTCGGTACTGTCTTAAGTTTCCTATGTTATATCAAGAAGGTGTGCAAAATATCCTCTTTAGCTGGCGTCGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCATTATAATTTTCTTCTTCTGCACAAAAGCTATGGAGATTCAGGCCTTTGATGATGAGGGAAGAACTGCCGGCAGAGATATACTAGGAGCAACCATGTATACCTGTGTCGTTTGGGTTGTAAACTTGCAGATGGCCCTTGCTATAAATTACTTCACCTTGATTCAACATATTTTCATCTGGGGCTCCATTGCTTTCTGGTATATTTTTCTCCTGGCATATGGAGCAATGTCTCCAAACTTTTCTGAAAATGCTTACAAAGTCTTCATCGAAACTCTTGCTCCGGCTCCTTCCTATTGGATCGTGACGTTGTTTGTGGTGATCTCAGCACTAGTACCATACTTCTCTTACTCAGCCATTCAGATGCGGTTCTTTCCCATGTATCACGAAATGGTACAATGGATAAGGTATGAAGGGAAGACAAGCGATCCCGAGTTTTGTGCTATGGTGCGGCAGAGGTCATTGCGGCCGACAACTGTGGGTTCAACAGCACGCTTCACAGCTAAGGAGGCTAACGACACTCGAGACACTGCTACTAACCATGGATAA 3573 0.4279 MVGGRRKKLHMSKIYSFACGRSSLKGDQHSSIGGRGYSRVVFCNEPESLEGGIRNYADNAVRSTKYNVATFLPKSLFEQFRRVANFYFLVTGILAFTELAPYQAVSAILPLIIVIGGTMVKEGIEDWGRKKQDIEVNDRRVKVHKGDGTFEYTEWKNLKVGHIVKVEKDEFFPADLLLLSSSYEEAVCYVETMNLDGETNLKLKQGLEVTSSLQDSNFGDFKATVKCEDPNANLYSFVGTMEFGEQVYTLSPQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSVDPPSKRSKIEKKMDKVIYFLFCIIFLMASVGSIIFGIATKDDLDNGVMKRWYLRPDDSTIFFDPKRAPAAAIFHCLTALMLYGFFIPISLYVSIEIVKILQSIFINRDIHMYYEEADKPARACTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGITEVERAMNIRSGLGSDDIRQSPDRKAPIKGFNFTDERIMNGNWVNEPNANVIQKFFRLLAICHTAIPEVNEDIGNVSYEAESPDEAAFVIAAREVGFEFYKRTQTSLSMYELDPVSGSKVERTYKLLNVLEFNSSRKRMSVIVQDEEGRIMLLSKGADSVMFERLAKNGREFEEETMEHVHEYAEAGLRTLVLAWRELDEEEYKEFDDKFTEGKNSVTEDREALIEEVADKIERNLILLGATAVEDKLQNGVPNCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQALEKVGDKTAIAKASSESIHHQISEGAQQLAASRGTSQQAFALIIDGKSLAYALEDNMKNMFLDLAVRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKSVAFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPAIALGVFDQDVSARYCLKFPMLYQEGVQNILFSWRRILSWMLNGFISAIIIFFFCTKAMEIQAFDDEGRTAGRDILGATMYTCVVWVVNLQMALAINYFTLIQHIFIWGSIAFWYIFLLAYGAMSPNFSENAYKVFIETLAPAPSYWIVTLFVVISALVPYFSYSAIQMRFFPMYHEMVQWIRYEGKTSDPEFCAMVRQRSLRPTTVGSTARFTAKEANDTRDTATNHG* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1868 1190 SUPERFAMILY Calcium ATPase, transduction domain A 141 282 IPR008250 -
Dod02g1868 1190 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 938 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g1868 1190 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1180 - -
Dod02g1868 1190 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Dod02g1868 1190 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Dod02g1868 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1134 IPR023298 -
Dod02g1868 1190 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod02g1868 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 693 IPR023299 GO:0000166
Dod02g1868 1190 CDD P-type_ATPase_APLT_Dnf-like 58 1005 - -
Dod02g1868 1190 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Dod02g1868 1190 Pfam Cation transport ATPase (P-type) 521 617 - -
Dod02g1868 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Dod02g1868 1190 SFLD Haloacid Dehalogenase 410 907 - -
Dod02g1868 1190 Gene3D - 534 669 IPR023299 GO:0000166
Dod02g1868 1190 SUPERFAMILY HAD-like 412 900 IPR036412 -
Dod02g1868 1190 Pfam Phospholipid-translocating ATPase N-terminal 42 107 IPR032631 -
Dod02g1868 1190 Gene3D - 687 896 IPR023214 -
Dod02g1868 1190 SFLD p-type atpase 410 907 IPR044492 -
Dod02g1868 1190 Gene3D - 125 285 - -
Dod02g1868 1190 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1868 Dod-Chr2 25624582 25632393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1868 1 1178 Primary Pumps ATPases AT1G68710 73.443 0.0 1872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1868 K01530 - gmx:100785037 2061.19