Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1862 ATGTCAGTGGCGTCGCCGTCTCCGGCGGCTTCTACCGCCGCGCCACCGTCACAACAGCCGTCCTCCGGCACTACTTCTCCTCCCCAGCAACCACCCGCTTCCCCCGCACCAAACACTTTAACTCCACCACCGCTATCATCAACGCCGTCTAACTCAACTCCGCCATCTCAGTCCTCACCTCCGGCCACCCCGTCCGCCGATCCTCCAGCCGCGCCGCTGCCAGCGCAACCGTCAACTCCGCCGTCTCGACCGCCTCAGGCTTCACCTCCCCCTTTGTCCGGAAACTCACCTCCATTGCCACCGCCTCCAAGAGCTCCCCCTCCAACCCAACAATCAGCTCCTCCTCCGTCACCGCCACCATCTTCTCTTGTCCCACCAAGACCGCCACCGCCATCACCATCACCGGTTCCGCCAAGAAGCTCTCCACCACCATCTGACCCCACTCCCACACCTCCATCAAACCCTCCTAAGAGTTCTTCTCCACCACCGTCTGACCCCACTCCCACACCTCCATCAAACCCTCCTAAGAGCACTTCTCCACCGTCACAGTCACCGGCCCCCAAGAATTCACCCCCTCCTCCGGCTTCTGTTCCGCCACCGCGAGGCTCTCCTCCACGGGCGCAGCCTGCGCCGCCCCCTAAAACCTCACCACCGCCGCAAGCATCTGCGCCGCCACCAACGGTGAATTCACCTCCAAGGCCGGCAGCTGTGCCTCCACCGAGGTCATCGCCGCCATCGCCGGCTTCAACCCCTCCTCGGAATTCGCCTCCACCTTTGGCTTCCACACCTCCAATTAGTGCACCTCCTCCTCCCCCTAGGACTAGTCCTCCTGCCACACCTAGTTCTCAACCAGCTCCACCTTCAAATTCCACACCAAAGTCATCTTCCCCACCGCCCCCCATTCGATCGGCGCCGCCTCCGGCATCGCTTGCTTCACCGCCTACATTCCAGACCTCAAATGATTCAAGCCCTGGAGCTGGAGGTAGTAGTGGAATTGGGACTGGTGCTGTGGTGGCTATTAGTGTAGTGGCTGGAGTTCTGTTGCTTGGCTTCATTGGAGTTGCTATCTGGTGCATGACAAGGCAGAAGAAAAAAGTGCCTCCGAATGGTGGTTATGTCATGCCATCCATTACTGCCACATCTCCTGATTCAGATTCATCCTTCTTTAAGACACATTCTTCAGCTCCTCTTGTACCAAGTGGCTCTGGCAGTGATGTTGTGTATACCCCATCTGATCCTGGTGGACTAGGAAACTCAAGGTCATGGTTTTCATATGAAGAATTAATCAAGGCCACAAATGGTTTCTCCACTGAGAATCTTTTGGGTGAGGGTGGATTTGGTGCTGTATATAAAGGATGCTTGCCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAAATTGGCGGAGGTCAGGGGGAGAGAGAATTCAAAGCTGAAGTTGAAATTATTAGTCGCGTACATCATCGCCATCTGGTTTCTTTGGTGGGATACTGCATTCAAGATAACGGAAGACTGCTTGTCTATGACTATGTCCCCAATAATACCCTTTATTTTCATCTACATGGGGAAGGTAGGCCTGTGTTAGAGTGGGCAAACCGTGTTAAAATCGCAGCTGGTGCAGCTCGAGGAATAGCTTATCTGCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCATCGAACATTCTTTTAGATTACAACTTTAAAGCTCAAGTCTCGGATTTCGGGCTAGCCAAATTAGCTCTTGATGCAAATACACATATAACCACACGCGTGATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCATCCAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTTTGGAGCTCATTACTGGGCGTAAGCCAGTGGATACATCTCAACCCTTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTGTTGAGTCATGCACTTCATAGTGAGGAATTTGGGAGTTTGGTAGATCCAAGGCTAGAAAACAACTACGTTGAAAGTGAAATGTTTATCATGATTGAAGCTGCTGCTGCTTGTGTGCGGCATTCAGCTGCAAAGAGACCTCGCATGGGACAGGTTGTCAGAGCTTTTGATAGCTTAGCAGCTTCTGATCTAACAAATGGAATGCGAGTTGGAGAAAGCGAGGCTTTTAACTCTGCGCAGCAATCCGAAGAAATAAGATTGTTTAGGAGGATGGCATTGGTGATCAAAAGTTATAGCACGGACTATTTTAGCCAGCCTAGTTTCAATACGTGA 2289 0.5194 MSVASPSPAASTAAPPSQQPSSGTTSPPQQPPASPAPNTLTPPPLSSTPSNSTPPSQSSPPATPSADPPAAPLPAQPSTPPSRPPQASPPPLSGNSPPLPPPPRAPPPTQQSAPPPSPPPSSLVPPRPPPPSPSPVPPRSSPPPSDPTPTPPSNPPKSSSPPPSDPTPTPPSNPPKSTSPPSQSPAPKNSPPPPASVPPPRGSPPRAQPAPPPKTSPPPQASAPPPTVNSPPRPAAVPPPRSSPPSPASTPPRNSPPPLASTPPISAPPPPPRTSPPATPSSQPAPPSNSTPKSSSPPPPIRSAPPPASLASPPTFQTSNDSSPGAGGSSGIGTGAVVAISVVAGVLLLGFIGVAIWCMTRQKKKVPPNGGYVMPSITATSPDSDSSFFKTHSSAPLVPSGSGSDVVYTPSDPGGLGNSRSWFSYEELIKATNGFSTENLLGEGGFGAVYKGCLPDGREIAVKQLKIGGGQGEREFKAEVEIISRVHHRHLVSLVGYCIQDNGRLLVYDYVPNNTLYFHLHGEGRPVLEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFKAQVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLLSHALHSEEFGSLVDPRLENNYVESEMFIMIEAAAACVRHSAAKRPRMGQVVRAFDSLAASDLTNGMRVGESEAFNSAQQSEEIRLFRRMALVIKSYSTDYFSQPSFNT* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1862 762 Gene3D Phosphorylase Kinase; domain 1 415 510 - -
Dod02g1862 762 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g1862 762 ProSiteProfiles Protein kinase domain profile. 435 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1862 762 MobiDBLite consensus disorder prediction 1 329 - -
Dod02g1862 762 MobiDBLite consensus disorder prediction 313 329 - -
Dod02g1862 762 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 151 757 - -
Dod02g1862 762 CDD STKc_IRAK 441 711 - -
Dod02g1862 762 SMART serkin_6 435 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1862 762 SUPERFAMILY Protein kinase-like (PK-like) 417 706 IPR011009 -
Dod02g1862 762 ProSitePatterns Protein kinases ATP-binding region signature. 441 463 IPR017441 GO:0005524
Dod02g1862 762 PANTHER BNACNNG34790D PROTEIN 151 757 - -
Dod02g1862 762 Pfam Protein tyrosine and serine/threonine kinase 437 706 IPR001245 GO:0004672|GO:0006468
Dod02g1862 762 MobiDBLite consensus disorder prediction 21 312 - -
Dod02g1862 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Dod02g1862 762 Gene3D Transferase(Phosphotransferase) domain 1 511 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1862 Dod-Chr2 25587602 25593444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1862 337 650 Trihelix Transcription Factor Family AT1G26150 72.785 2.23e-168 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod02g1862 PK_Tyr_Ser-Thr 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1862 - - gmx:100794393 762.681