Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1842 ATGGAAAGGAGAGGAGGGGATGTAGCTTTTTTTTGTTTAGCTTTGTTCTTCATGTGGACTTCAGTATGTGGTTTGCTTTCTCCTAAAGGTGTCAACTATGAAGTTCAAGCTTTGATTGACTTGAAGGAGCATCTAAAGGATCCTCTTAATGTCCTTGGTAACTGGGATAGTAATGCTGTGGATCCCTGCAGCTGGACCATGGTCACTTGTTCTCCTGATCATTTTGTGACTATCCTAGCAATTCCAAGTCAAAACTTATCTGGGGTACTCTCACCAAGCATAGGCAACTTAACAAACCTCCAGACTGTGCTCCTGCAGCAGAATAATATAACAGGATCAATCCCCTCTGAGATTGGGAGGCTTCAAAGGCTTCAAACTCTTGATCTTTCTGAGAATTCCTTCACTGGTCAACTTCCAGATACTCTCTCCCATATGAAAGGTCTCCATTATTTGCGGCTAAACAACAACAGTCTCTCAGGAGCAATTCCTTCCTCTTTGGCTGACATGCGCCAACTTGCCTTTCTGGATATCTCTTACAATAACTTGAAGGGACCTGTACCTAGAATAAATGCAAAAACATTCAATATTGTAGGCAATCCCCAGATATGTAACACAGGACTTGACCAAACCTGCTTTCGAACAACACTTATTTCTTCTGCCATGAATATTTCTCAAGATTCACAATCCTCCAATAGACCGAAGAGCCACAAAATTGCCTTAGCGTTTGCTTCAAGCCTAAGCTGCATCTGCTTACTAACTCTTGGGTTTGGCTTCCTCCTCTGGTGGAGACAAAGATACAACAAGCAAATATTCTTTGATGTTAATGAACAACACCATGAAGAGGTTTGCCTTGGTAACCTCAAGAAGTTTCATTTCAGAGACCTTCAGCTTGCCACAAACAACTTCAGCAGCAAGAACTTGATTGGTAAAGGTGGTTATGGAAATGTGTACAAAGGGTATCTCCCAGATGGCACAATTATAGCAGTGAAAAGGCTCAAAGATGGAAGTGCCAGTGGAGGTGAGATCCAATTCCAGACTGAACTTGAGATGATCAGCTTGGCTGTCCACCGAAATCTTCTTCGCCTGTATGGATTCTGCGTGACAGCAACAGAGAGGCTCTTGGTCTTTCCCTACATGTCAAATGGTAGTGTTGCCTCCCGTCTTAAAGCCAAGCCAGCCCTGGACTGGGGTACAAGGAAGAGGATAGCTTTAGGAGCTGCAAGGGGATTGCTGTATTTGCATGAGCAGTGTGATCCAAAGATTATTCATAGGGATGTGAAGGCTGCAAATATCTTACTTGACGATTATTGTGAGGCTGTTGTAGGAGATTTTGGGTTGGCAAAGCTGTTGAATCACACTGATTCACACGTGACAACAGCTGTTAGAGGCACTGTAGGACACATAGCCCCTGAGTATCTCTCAACAGGCCAATCCTCTGAGAAAACTGATGTTTTTGGGTTTGGGATCCTTCTTCTTGAATTGATTTCTGGCCAAAGAGCATTTGAATTTGGCAAAGCAGCAAACCAGAAAGGAGCTATGTTTGACTGGGTGAAGAAAATCCATCAAGAGAAGAAAATTGACTTGTTAGTTGACAAGGACCTGAAGAACAACTATGATAGGATTGAGCTTGATGAAATTGTTCAAGTAGCTCTTTTGTGCACTCAGTACCTCCCAAGCCATAGGCCCAAGATGTCTGAGGTAGTTAGAATGCTTGAAGGAGATGGTCTTGCAGAGAAGTGGGAAGCCTCACAGAGAGCTGAATCAACAAGAAGTAGAGGGAATGAATTCTCTTCTTCGGAGCGCTACTCCGATCTTACTGATGACTCCTCACTGCTTGCCCAAGCAATGGAGCTTTCTGGACCAAGATGA 1869 0.4355 MERRGGDVAFFCLALFFMWTSVCGLLSPKGVNYEVQALIDLKEHLKDPLNVLGNWDSNAVDPCSWTMVTCSPDHFVTILAIPSQNLSGVLSPSIGNLTNLQTVLLQQNNITGSIPSEIGRLQRLQTLDLSENSFTGQLPDTLSHMKGLHYLRLNNNSLSGAIPSSLADMRQLAFLDISYNNLKGPVPRINAKTFNIVGNPQICNTGLDQTCFRTTLISSAMNISQDSQSSNRPKSHKIALAFASSLSCICLLTLGFGFLLWWRQRYNKQIFFDVNEQHHEEVCLGNLKKFHFRDLQLATNNFSSKNLIGKGGYGNVYKGYLPDGTIIAVKRLKDGSASGGEIQFQTELEMISLAVHRNLLRLYGFCVTATERLLVFPYMSNGSVASRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLNHTDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRAFEFGKAANQKGAMFDWVKKIHQEKKIDLLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNEFSSSERYSDLTDDSSLLAQAMELSGPR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1842 622 SUPERFAMILY L domain-like 33 303 - -
Dod02g1842 622 SMART serkin_6 302 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1842 622 Pfam Protein kinase domain 303 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1842 622 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Dod02g1842 622 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 8 622 - -
Dod02g1842 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Dod02g1842 622 Gene3D Transferase(Phosphotransferase) domain 1 379 591 - -
Dod02g1842 622 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Dod02g1842 622 SUPERFAMILY Protein kinase-like (PK-like) 281 572 IPR011009 -
Dod02g1842 622 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Dod02g1842 622 MobiDBLite consensus disorder prediction 589 610 - -
Dod02g1842 622 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Dod02g1842 622 ProSiteProfiles Protein kinase domain profile. 302 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1842 622 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Dod02g1842 622 MobiDBLite consensus disorder prediction 580 610 - -
Dod02g1842 622 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1842 Dod-Chr2 24956208 24961595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1842 9 622 Receptor kinase-like Gene Family AT5G16000 73.120 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod02g1842 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1842 - - gmx:100790194 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1842 02 24956208 24961595 Dod02g1842 02 24956208 24961595 ECH