LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g1841	ATGGCAAAGCATGCTTCTGGTGTTGATTCCCATCATAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGATTAAAAGGAAGGACTCTGATCGCTATGAGATTGCTCCAATCCAAGATCAACTATCCTTTGAGAAGGGTTTTTACATCGTAATCCGTGCATGCCAATTGTTAGCCCAAAAGAATGATCGAATAATATTGGTAGGGGTGGCAGGTCCTTCTGGGGCTGGGAAGACTGTATTTACTGAAAAGATATTAAGCTTCATGCCCAGCATCACAGTCATTTCAATGGACAATTACAATGATTCTAGTAGAATCGTTGATGGAAACTTTGACGATCCTCGCTTAACAGACTATGACACATTGCTCCAGAATCTACATGATTTAAAAGAAGGAAAGGCAGTTCAGGTTCCGATATATGATTTCAAGTCTAGTTCACGTACAGGATACAGTGATTACAATGAAAATGTGAAGTGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATTCGTGACATAGAACGTGCTGGTCAAGAACCTGAAGAAATCATTCATCAAATATCTGAGACAGGTACATACTATCATAACTTCAGCTTTTTATACAGATACAGGAAAGCAATTGTGTTTCCAGAAGTGCTCACGTGTATTCTTCTGCAGGTATATCCAATGTACAAGGCATTCATCGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAATCCTTTTGCTGGATTCCAGAGCGCTACGTACATATTAAAGTCAGCAAGGAATGTGACAGCAGATCAAATTAAGGCTTTTCTCTCTGAAGATTTTAAGGAAACTGCAGAACAGACTTATGACATATATCTTCTACCACCTGGTGAAGATCCTGAAACTTGCCAATCATATTTACGGATGCGAAATAAGGAAGGCAAATACAGTCTCATGTTTGAGGAATGGGTGACCGATAATCCCTTTGTCATATCACCAAGAATTACTTTTGAGGTCGGTGTGCGTCTTCTTGGTGGACTAATGGCCTTGGGATACACAATAGCTACCATCCTTAAAAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTGAAATTAGATTGGCTTGAGCAACTCAATCGGCATTATGTTCAGGTGCAAGGAAGAGATCGCCTAGTTGTGCAATCTTTGGGACAACAGCTGGGTCTAGAAGGTTCCTACATTCCTCGCACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAGGTTATGGCCCTACCAGATGATTTAAAGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCCGACAGGGTTGCCATGAGACATAAATACATGCGGAGTGGAATGTCACAGTCATATACAACTCAGGGTGACAAAAATTTAGCCAAAGTTAATGGATATGTTGCCAACAGTCGAGGGTTTGGTGAAAGGCAGTCAGATTCCTCAACAGCAACAGCAAGTCAGGGAGCCATCAACCAGCTTTCAGAGCAAATTTCTGCCCTAAATGATAGAATGGATGATTTTACAAATCGTATCGAGGAGCTGAACTCGAAGTTAACCATCAGGAAAAGTTCTCCAAGCCAACAAAATATGTCGCTTCAAGCTGAGGCCTGCAATGGTTCTGCTCATACCTCTTACTTCATCACCGGTTTGGGCAATGGCTCCCTGACTGGATCCAAATTGCCAAATTCCTCATCTTCGTCCCAATTAGCTAAAGATCCTCCTTTAATGGATGAGGTATCTCTTGAGTCTAATATCCTATCTCACTCTCAGATTATGTTATTCTCCGGAGTGTTGACCCTTTTTAAGTTGATTCTTTCAGAGCTGCAACTTTCTGGAAGAGAAATTTTTTATGGTTTCCATTATGATGAAACATCCAAATTTCTCCCGTCTGGTTTTGATTTGTAA	1953	0.4076	MAKHASGVDSHHKRLGLLKDQVHLIKRKDSDRYEIAPIQDQLSFEKGFYIVIRACQLLAQKNDRIILVGVAGPSGAGKTVFTEKILSFMPSITVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLHDLKEGKAVQVPIYDFKSSSRTGYSDYNENVKCGVHLDLVKRVIRDIERAGQEPEEIIHQISETGTYYHNFSFLYRYRKAIVFPEVLTCILLQVYPMYKAFIEPDLQTAHIKIINKFNPFAGFQSATYILKSARNVTADQIKAFLSEDFKETAEQTYDIYLLPPGEDPETCQSYLRMRNKEGKYSLMFEEWVTDNPFVISPRITFEVGVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVVQSLGQQLGLEGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRHKYMRSGMSQSYTTQGDKNLAKVNGYVANSRGFGERQSDSSTATASQGAINQLSEQISALNDRMDDFTNRIEELNSKLTIRKSSPSQQNMSLQAEACNGSAHTSYFITGLGNGSLTGSKLPNSSSSSQLAKDPPLMDEVSLESNILSHSQIMLFSGVLTLFKLILSELQLSGREIFYGFHYDETSKFLPSGFDL*	651

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g1841	650	PRINTS	Uridine kinase signature	65	82	-	-
	Dod02g1841	650	PRINTS	Uridine kinase signature	227	240	-	-
	Dod02g1841	650	PRINTS	Uridine kinase signature	132	147	-	-
	Dod02g1841	650	Gene3D	-	18	211	IPR027417	-
	Dod02g1841	650	CDD	UMPK_like	67	242	-	-
	Dod02g1841	650	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	64	214	IPR027417	-
	Dod02g1841	650	Pfam	Phosphoribulokinase / Uridine kinase family	68	149	IPR006083	GO:0005524\|GO:0016301
	Dod02g1841	650	SUPERFAMILY	CYTH-like phosphatases	265	410	IPR033469	-
	Dod02g1841	650	Gene3D	-	257	416	-	-
	Dod02g1841	650	ProSiteProfiles	CYTH domain profile.	251	413	IPR023577	-
	Dod02g1841	650	PANTHER	URIDINE KINASE	216	609	-	-
	Dod02g1841	650	PANTHER	URIDINE KINASE	156	191	-	-
	Dod02g1841	650	PANTHER	URIDINE KINASE	6	151	-	-
	Dod02g1841	650	Coils	Coil	506	533	-	-
	Dod02g1841	650	PANTHER	PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN	156	191	-	-
	Dod02g1841	650	PANTHER	PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN	216	609	-	-
	Dod02g1841	650	PANTHER	PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN	6	151	-	-
	Dod02g1841	650	Pfam	CYTH domain	272	407	IPR023577	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g1841	Dod-Chr2	24851889	24857438	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g1841	67	144	PRT Gene Family	AT4G26510	31.395	2.95e-07	51.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g1841	K00876		-	gmx:100797542	935.25