Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1833 ATGATTCCCGTTGAGATCAGAGGAATCCAGTATCTAGCACCTGAAAACCCATTCCTAGCTCCACCTAACCTTGGCTTGCTTCAGAGTGACATCCCAAACTACCATCTGAATAGCCTCTTGAGCAACTTGCCATCAAACTGCCACTTCCCTTCTGCAGGCCTTGAATTTGTGCCCCCCTCATGCCTCAGCAGCAACTCGACTTCTGATGAAGCTGATGAGCTTCAGCTCGGCATCATCGACGAAAGGAAGCAGCGACGAATGATATCGAACCGAGAATCTGCCCGGAGATCAAGGATGAGGAAGCAGAAGCACTTGGATGAGCTGTGGTCACAGGTGGTTAGGCTCAGAACTGAGAACCATAACCTTATTGACAAACTGAACCATGTGTCTGAGTCCCATGTAAGAGTCCTTCAAGAGAATGCACGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCTGACGTGCAAATTGGCAATTCCTTTGCTTGCACCGTGAGAGATTTTGATGAGGCTCCATGCAACACTTCTCAAATCAGAGATGAATCCTCCAACCAAACCACCACTTGTTTGGACTTGATTCACTAG 591 0.4805 MIPVEIRGIQYLAPENPFLAPPNLGLLQSDIPNYHLNSLLSNLPSNCHFPSAGLEFVPPSCLSSNSTSDEADELQLGIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHVRVLQENARLKEEASDLRQMLADVQIGNSFACTVRDFDEAPCNTSQIRDESSNQTTTCLDLIH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1833 196 Pfam bZIP transcription factor 82 138 IPR004827 GO:0003700|GO:0006355
Dod02g1833 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 190 IPR044521 -
Dod02g1833 196 SUPERFAMILY Leucine zipper domain 82 133 IPR046347 GO:0003700|GO:0006355
Dod02g1833 196 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Dod02g1833 196 CDD bZIP_plant_GBF1 83 133 IPR045314 GO:0003700|GO:0006355
Dod02g1833 196 PANTHER BZIP PROTEIN (ATBZIP48) 1 190 - -
Dod02g1833 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Dod02g1833 196 Gene3D - 80 134 - -
Dod02g1833 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Dod02g1833 196 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1833 Dod-Chr2 24670141 24670981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1833 23 165 bZIP Transcription Factor Family AT3G30530 55.696 6.65e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod02g1833 bZIP_1 1.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1833 - - gmx:778126 300.441