Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1825 ATGAGTAACAAAGAAGACTTTCAGCTGGATAGAAACGAGGATCCTATGGATTATTCTACTGGAATGCCCTCAGACTGGAGATCTGAAGGTGCCAATCTTGCAAATTCGTCTGTGAGCTTGGTTGCCATGGGGGATTCTATGAATTTCAGCAGAGGGGATCTCAATGGTACCTCTTCATGTTCCTCTGCTTCAATGGTGGACTCATTTGGTCCAAACTTTTGGGACCCACACACCACCAATTCCCAAAACATGGCGTTCTGGGGCATTAATGTCCAAAACAATGGGAGCTCTTCAAACACGGTTGGAATCAGGAAAGATGGATTTGGCTTTGGAAGACCTGGTCATGATCATGGAACACTTGAAATGGGATGGAACCAGGCTAACGCCATGTTGAAGGGGGATGGTTTCTTACCAAATGGACCACGGGTATTCCCCCAGAGTTTATGTCAGTTCGCAACTGATTCTGGATTTATTGAGCATGCTGCGAGATTCTCATGCTTCAGTGGAGGGAATTTTGGTGATATGGTAAATGCATATGGGATTCCTCAATCCATGGGGAGGTATGCTGGGATTGGTGGGACAATACATGGAACAAGAGATGCTCTTGTTGGTGTTGTGTTAAAATCATCAGTACATGGAGGGCAATCTCAAGAGAGTAATCTGAATGTAGCCGAAGCTGCAAACGATGTGTCTCCATCTGTTGAGCGTCTGGCTACTAAAGCAAGCCCACTCAAGAATGATAGGAGAAGTGAAAACCATGTAATGTCTCAAGGTGAAGGGAAACAAGCACTTGTGAGGGTTACTAATGAGTCCGAGAGAGCTGAATCTAGTGATGATGATGATGGTGGCGGCAGTGAGGATGATTCCCCAATGTTGGAGGGCACTAGTGGGGAACCTTGTATTAGAGGGCTAGACTCAAAGAAAAGGAAAAGAATTGGGCAGAATGCTGATAATGATAAAGCCAACGGAGCTCCAGAACTACCAAGTGAAGGTGCAAAGGACAACTCTGAGAGTCAACGGAAGGGAGATCAACAAACAACTTCAACAACCAAGGCTTCTGGAAAGAATGCCAAACAAGGGCCTCAAGCTTCTGATTCACCTAAGGAGGAATACATACATGTCAGGGCTCGCCGGGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGGGTAAGATGTGGTAAGAGATTATTTGTGATGAAAAAGATTTTTCTTTTCTGGATGAAGAATTTTAGATTATTTACATTTTCACTGCAGGTGAGGCGGGAAAAGATAAGTGAGAGGATGAAGTTTCTTCAAGACCTTGTACCTGGATGCGGCAAGGTCACTGGCAAGGCAGTGATGCTAGATGAGATCATCAACTATGTACAATCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATATTGAAGGACTTCTTCCTAAAGATATTCTTCACCACCAAACTGGTCCTTCATCTGCACTGGGGTTTCCTTTAGAAATGCCTATGGCATTCCCTCCACTGCATCCATCTCAACCTGGACTAATTCAGTCTACTCTTCCTAGTATGGCTAACTCTTCTGATATCCTTCGGAGAACTGTTCATTCACAGTTGGCCCCCTTGAGTGGAGGATTCAAGGAGCCAAATCAGCTGCCTGATGTGTGGGAAGATGAGCTTCACAATGTTGTACAGATGAGCTTTGCTTCAACTGCTCCCCTGAGTAGTCAAGATGTGGATGGTACTGCGGCAGCAAGCCGATGA 1776 0.4499 MSNKEDFQLDRNEDPMDYSTGMPSDWRSEGANLANSSVSLVAMGDSMNFSRGDLNGTSSCSSASMVDSFGPNFWDPHTTNSQNMAFWGINVQNNGSSSNTVGIRKDGFGFGRPGHDHGTLEMGWNQANAMLKGDGFLPNGPRVFPQSLCQFATDSGFIEHAARFSCFSGGNFGDMVNAYGIPQSMGRYAGIGGTIHGTRDALVGVVLKSSVHGGQSQESNLNVAEAANDVSPSVERLATKASPLKNDRRSENHVMSQGEGKQALVRVTNESERAESSDDDDGGGSEDDSPMLEGTSGEPCIRGLDSKKRKRIGQNADNDKANGAPELPSEGAKDNSESQRKGDQQTTSTTKASGKNAKQGPQASDSPKEEYIHVRARRGQATNSHSLAERVRCGKRLFVMKKIFLFWMKNFRLFTFSLQVRREKISERMKFLQDLVPGCGKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLPKDILHHQTGPSSALGFPLEMPMAFPPLHPSQPGLIQSTLPSMANSSDILRRTVHSQLAPLSGGFKEPNQLPDVWEDELHNVVQMSFASTAPLSSQDVDGTAAASR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1825 591 MobiDBLite consensus disorder prediction 302 316 - -
Dod02g1825 591 MobiDBLite consensus disorder prediction 1 30 - -
Dod02g1825 591 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 419 590 IPR024097 GO:0006355
Dod02g1825 591 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 396 IPR024097 GO:0006355
Dod02g1825 591 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 419 478 IPR036638 GO:0046983
Dod02g1825 591 SMART finulus 415 465 IPR011598 GO:0046983
Dod02g1825 591 PANTHER BHLH TRANSCRIPTION FACTOR 10 396 - -
Dod02g1825 591 PANTHER BHLH TRANSCRIPTION FACTOR 419 590 - -
Dod02g1825 591 MobiDBLite consensus disorder prediction 341 363 - -
Dod02g1825 591 Gene3D - 419 479 IPR036638 GO:0046983
Dod02g1825 591 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 409 459 IPR011598 GO:0046983
Dod02g1825 591 CDD bHLH_AtBPE_like 370 484 - -
Dod02g1825 591 MobiDBLite consensus disorder prediction 226 369 - -
Dod02g1825 591 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1825 Dod-Chr2 24400368 24404704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1825 1 574 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 41.652 3.14e-110 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1825 - - gmx:100797720 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1825 02 24400368 24404704 Dod02g1825 02 24400368 24404704 ECH