Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1810 ATGGCCTCAAAGACAAGAAACTCCGCCATTCATGTGGCTCTCATAGTCATGGTAGCAATCCTAATATCAACTAATGTTGTTTTCTGTGATGATACTGTTCCAGTTCCAGCTGACAGGAGCCAATTGGCCGGTTGGTTCAATCAAAACGTGGGGCCCTTAGATTCAAGGAAAAATGAACTAGACCCTGCACTGGTGGCTGCTGAGTCAAATGCCACGGTTATCAAGGTCATGCAAGATGGAAGTGGGGCTTTTAAGACCATCAGTGACGCCATTAAGACCATCCCTACAGGGAACACCCATCGTGTGATTCTGTACATTGGAGGTGGAGATTATAATGAGAAAGTCAGAATTGAGAGGACTATGCCTTTTATCACCTTGTTTGGGGATCCAGCAAACATGCCAAACTTGACCTTTGGAGGCACTGCAAAGAAATATGGCACTGTTGACAGTGCCACACTGATTGTTGAATCGGATTACTTTGTGGCTGCCAACATCATGATCTCGGTTAGCATACTATTACAATTACATTGA 531 0.4444 MASKTRNSAIHVALIVMVAILISTNVVFCDDTVPVPADRSQLAGWFNQNVGPLDSRKNELDPALVAAESNATVIKVMQDGSGAFKTISDAIKTIPTGNTHRVILYIGGGDYNEKVRIERTMPFITLFGDPANMPNLTFGGTAKKYGTVDSATLIVESDYFVAANIMISVSILLQLH* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1810 176 Pfam Pectinesterase 74 168 IPR000070 GO:0030599|GO:0042545
Dod02g1810 176 Gene3D - 29 171 IPR012334 -
Dod02g1810 176 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 167 - -
Dod02g1810 176 PANTHER PECTINESTERASE PPME1-RELATED 13 167 - -
Dod02g1810 176 SUPERFAMILY Pectin lyase-like 71 167 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1810 Dod-Chr2 23958579 23959109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1810 11 168 Carbohydrate Esterase AT1G69940 53.165 6.82e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1810 K01051 - gmx:100775404 234.958