Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1808 ATGGCCTCAAAGACAAGAAGCTCCGCCATTCATGTGGCTCTCATGGTCATAGTAGCAATCCTAATATCAACTAATGTTGTTTTCTGTGATGACACTGTTCCAGTTCCAGCTGATAGGAGCCAATTGGCCGGTTGGTTCAATCAAAACGTGGGGCCCTTAGATTCAAGGAAGAACGAACTAGACCCTGCACTGGTGGCCGCTGAGTCAAATGCCACGGTTATTAAGGTCATGCAAGATGGAAGTGGGGCTTTTAAGACCATCAGTGATGCCATTAAGACCATCCCTACAGGGAACACCCAGCGTGTGATTATATACATTGGAGGTGGAGATTACAATGAGAAAGTCAGAATTGAGAGGACTATGCCTTTTATCACCTTGTTTGGGGATCCAGCAAACATGCCAAACTTGACCTTTGGAGGCACTGCAAAGAAATATGGCACTGTTGATAGTGCCACATTGATTGTTGAATCAGATTACTTTGTGGCTGCCAACATCGTGATCTCGGTTAGCATACTATCTACAATTACATTGAAATCCAAGTGCTTTATCATTTAA 555 0.4378 MASKTRSSAIHVALMVIVAILISTNVVFCDDTVPVPADRSQLAGWFNQNVGPLDSRKNELDPALVAAESNATVIKVMQDGSGAFKTISDAIKTIPTGNTQRVIIYIGGGDYNEKVRIERTMPFITLFGDPANMPNLTFGGTAKKYGTVDSATLIVESDYFVAANIVISVSILSTITLKSKCFII* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1808 184 PANTHER PECTINESTERASE PPME1-RELATED 14 168 - -
Dod02g1808 184 Gene3D - 29 175 IPR012334 -
Dod02g1808 184 SUPERFAMILY Pectin lyase-like 71 167 IPR011050 -
Dod02g1808 184 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 168 - -
Dod02g1808 184 Pfam Pectinesterase 74 167 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1808 Dod-Chr2 23792627 23793181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1808 11 167 Carbohydrate Esterase AT1G69940 54.777 6.18e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1808 K01051 - gmx:100775404 231.491