Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1807 ATGGCCTCAAAGACAAGAAACTCCGCCATTCATGTGGCTCTCATGGTCATGGTAGCAATCCTAATGTCAACTAATGTTGTTTTTTGTGATGACATTGTTCCAGTTCCAGCTGACAGGAGCCAATTGGCCAGTTGGTTCAATCAAAACGTGGGGCCCTTAGATTCAAGGAAGAACGAACTAGACCCTGCACTGGTGGCTGCTGAGTCAAATGCCACGGTTATTAAGGTCATGCAAGATGGAAGTGGGGCTTTTAAGACCATCAGTGACGCCATTAAGACCATCCCTACAGGGAACACCCAGCGTGTGATTCTGTACATTGGAGGCGGAGATTATAATGAGAAAGTCAGAATTGAGAGGACTATGCCTTTTGTCACCTTTTTTGGGGATCCATCAAACATGCCAAACTTGACCTTTGGAGGCACTGCAAATAAATATGGCACTGTTGACAGTGCCACATTGATTGTTGAATCAGATTACTTTGTAGCTTCCAACATCATGATCTCGAATACTGCACCAGAACCTGATGGAGGGGCAGAAGGAGCTCAAGCTCTGGCGTTGAGAATATCTGGTGACAAAGCAGCGTTTTATAATTGCAAGTTTTACGGATTCCAGGACACAGTGTGTGATGATAGGAATAGGCATCTTTTCAAAGACTGCTTAATTCAAGGCACTGTGGATTTCATTTTCGGAAGTGGGAAGTCACTATATTTGAACACCGAGCTAAGACTGATGGGCGACGGTGTGATAGTGGCACAAGCAAGGACAAGTGACAAAGAGGATAGTGGCTACTCATTTGTGCAATGTGACATAACTGGGACAGGGAGCTCTATGTTGGGTAGAGCATGGATGTCTCATCCCAAAGTCGTTTACGCTTATTGCACTATGAGCAATGCTGTGAATTCTACAGGGTGGAGTGACAACATGCACCCTGAATTTGATTCAACCGTATTTTTCGGAGAGTACAAGAATACAGGACCTGGTGCAAATCTGGCTGGGCGTAAGATATCAAAGCAGCTAAGTGATGCAGATGCCCTGCCTTTTATTCAGGCTTGGCTTTATTCAGGCTTCCAAATGGCTACTACCTCCTCCAACTCCCCAAGTCTAATTCATTAA 1113 0.4492 MASKTRNSAIHVALMVMVAILMSTNVVFCDDIVPVPADRSQLASWFNQNVGPLDSRKNELDPALVAAESNATVIKVMQDGSGAFKTISDAIKTIPTGNTQRVILYIGGGDYNEKVRIERTMPFVTFFGDPSNMPNLTFGGTANKYGTVDSATLIVESDYFVASNIMISNTAPEPDGGAEGAQALALRISGDKAAFYNCKFYGFQDTVCDDRNRHLFKDCLIQGTVDFIFGSGKSLYLNTELRLMGDGVIVAQARTSDKEDSGYSFVQCDITGTGSSMLGRAWMSHPKVVYAYCTMSNAVNSTGWSDNMHPEFDSTVFFGEYKNTGPGANLAGRKISKQLSDADALPFIQAWLYSGFQMATTSSNSPSLIH* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1807 370 Pfam Pectinesterase 74 333 IPR000070 GO:0030599|GO:0042545
Dod02g1807 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 350 - -
Dod02g1807 370 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Dod02g1807 370 Gene3D - 68 363 IPR012334 -
Dod02g1807 370 SUPERFAMILY Pectin lyase-like 71 351 IPR011050 -
Dod02g1807 370 PANTHER PECTINESTERASE 63-RELATED 39 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1807 Dod-Chr2 23746162 23748150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1807 11 352 Carbohydrate Esterase AT1G69940 55.807 8.53e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1807 K01051 - gmx:100786427 490.345