Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1805 ATGCAAGATGGAAGTGGGGCTTTTAAGACCATCAGTGACGCCATTAAGACCATCCCTACAGGGAACACCCAGCGTGTGATTCTATACATTGGAGGTGGAGATTATAATGAGAAAGTCAGAATTGAGAGGACTATGCCTTTTATCACCTTGTTTGGGGATCCAACAAACATGCCAAACTTGACCTTTGGAGGCACTGCAAAGAAATATGGCACTGTTGACAGTGCCACATTGATTGTTGAATCAGATTACTTTGTGGCTGCCAACATCATGATCTCGAATACTGCACCAGAACCTGATGGAGAGGCAGAAGGAGCTCAAGCTCTAGCGTTGAGAATATCTGGTGACAAAGCAACGTTTTATAATTGCAAGTTTTACGGATTCCAGGACACAGTGTGTGATGACAGGAATAGGCATCTTTTCAAAGACTGCTTAATTCAAGGCACTGTGGATTTCATTTTCGGAAGTGGGAAGTCACTATATTTGGTAAATATAATGAGGAATTTGTTGAACAACAATATCCACATCATTCTACGTGGTGAAATTTTCCATTGA 552 0.4149 MQDGSGAFKTISDAIKTIPTGNTQRVILYIGGGDYNEKVRIERTMPFITLFGDPTNMPNLTFGGTAKKYGTVDSATLIVESDYFVAANIMISNTAPEPDGEAEGAQALALRISGDKATFYNCKFYGFQDTVCDDRNRHLFKDCLIQGTVDFIFGSGKSLYLVNIMRNLLNNNIHIILRGEIFH* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1805 183 ProSitePatterns Pectinesterase signature 2. 145 154 IPR033131 -
Dod02g1805 183 PANTHER PECTINESTERASE 63-RELATED 1 165 - -
Dod02g1805 183 Gene3D - 1 179 IPR012334 -
Dod02g1805 183 Pfam Pectinesterase 2 159 IPR000070 GO:0030599|GO:0042545
Dod02g1805 183 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 165 - -
Dod02g1805 183 SUPERFAMILY Pectin lyase-like 2 160 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1805 Dod-Chr2 23666066 23666744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1805 6 176 Carbohydrate Esterase AT1G69940 60.234 2.84e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1805 K01051 - gmx:100816036 279.641