Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1804 ATGGCCTCAAAGACAAGAAGCTCTGCCATTCATGTGGCTCTCATGGTCGTGGTAGCAATCCTAATATCAACTAATGTTGTTTTCTGTGATGACACTATTCCAGTTCCAGCTGACAGGAGCCAATTGGCTAGTTGGTTCAATCAAAATGTGGGACCCTTAGATTCAAGGAAGAACGAACTAGACCCTGCATTGGTGGCTGCTGAGTCAAATGCCACGGTTATTAAGGTCATGCAAGATGGAAGTGGGGCTTTTAAGACCATCAGTGACGCCATTAAGACCATCCCTACAGGGAACACCCATCGTGTGATTCTGTACATTGGAGGTGGAGATTATAATGAGAAAGTCAGAATTGAGAGGACTATTCCTTTTATCACCTTGTTTGGGGATCCAACAAACATGCCAAACTTGACCTTTGGAGGCACTGCAAAGAAATATGGCACTGTTGACAGCGCCACATTGATTGTTGAATCAGATTACTTTGTGGCTGCCAACATCATGATCTCGAATACTGCACCAGAACCTGATGGAGTGGCAGAAGGTAGCTCAAGCTCTGGCGTTGAGAATATCTGGTGA 573 0.4503 MASKTRSSAIHVALMVVVAILISTNVVFCDDTIPVPADRSQLASWFNQNVGPLDSRKNELDPALVAAESNATVIKVMQDGSGAFKTISDAIKTIPTGNTHRVILYIGGGDYNEKVRIERTIPFITLFGDPTNMPNLTFGGTAKKYGTVDSATLIVESDYFVAANIMISNTAPEPDGVAEGSSSSGVENIW* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1804 190 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 182 - -
Dod02g1804 190 Gene3D - 28 185 IPR012334 -
Dod02g1804 190 SUPERFAMILY Pectin lyase-like 71 180 IPR011050 -
Dod02g1804 190 Pfam Pectinesterase 74 171 IPR000070 GO:0030599|GO:0042545
Dod02g1804 190 PANTHER PECTINESTERASE PPME1-RELATED 14 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1804 Dod-Chr2 23654402 23655092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1804 11 183 Carbohydrate Esterase AT1G69940 53.179 9.19e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1804 K01051 - gmx:100775404 246.128