Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1776 ATGAACCACGAGGAGAAAGTCACCATGGACCTTGTTCCACCCTCTGAGCACCTCTGCTACGTTCGTTGCAATTTCTGCAACACTGTGCTTGCGGTTGGCATCCCATGCAAGAGGCTGTTAGATACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCTTTTCTGAGCACAAGACCCCCATATTCTCAAAATCAAACCATTGATCACACATTGAGTCTCCAGCAGGGGTTTTACGGTGATTCCAAAAAGGGGCAAGCATCATCTTCATCTTCTTCACCAACTACATCTACCGAGTCAGTGTCCCCTAAAGCACCTCCATTTGTTGTAAAACCACCTGAGAAGAAGCACCGTCTCCCATCTGCTTACAACCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCCAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCCAAAAATTTTAGCCTTTAG 471 0.4777 MNHEEKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPYSQNQTIDHTLSLQQGFYGDSKKGQASSSSSSPTTSTESVSPKAPPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNFSL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1776 156 PANTHER PROTEIN CRABS CLAW 6 155 - -
Dod02g1776 156 Pfam YABBY protein 14 154 IPR006780 GO:0007275
Dod02g1776 156 SUPERFAMILY HMG-box 100 152 IPR036910 -
Dod02g1776 156 MobiDBLite consensus disorder prediction 74 117 - -
Dod02g1776 156 Gene3D High mobility group box domain 96 155 IPR036910 -
Dod02g1776 156 MobiDBLite consensus disorder prediction 74 103 - -
Dod02g1776 156 PANTHER PROTEIN YABBY 6-RELATED 6 155 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1776 Dod-Chr2 22794422 22795756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1776 1 155 C2C2-YABBY Transcription Factor Family AT1G69180 64.557 7.85e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dod02g1776 YABBY 1.5e-53 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1776 K25796 - gmx:100819079 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1776 02 22794422 22795756 Dod02g1776 02 22794422 22795756 ECH