Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1768 ATGGCGGCGATGATGCAAGGGGTGCAGAAGAACACGCTGTACGTTGGGGGTTTGGCGGAGGAGGTTAACGAGGCCATACTGCACGCTGCGTTCATACCGTTCGGGGACATCAAGGACGTCAAGACGCCGCTCGACCAGGCCACGCAGAAGCACCGCTCCTTCGGCTTCGTGACCTTCTTGGAGAGGGAGGACGCCTCCGCCGCCATGGACAACATGGACGGCGCCGAGCTCTACGGCCGCGTCCTCACCGTCAACTATGCCCTCCCCGAGCGCATCAAGGGTGGCGAACAGGGCTGGGCCGCTCAGCCAATTTGGGCTGATGCGGATACTTGGTTTGAGCGGCAACAACAAGAAGAAGAAATGCGTCGTCTTGAAGCAGAGAATCGAGCTGCAATGCAGGCTGCAGAAGATTTGCACAGGAAAAAGGCGGCCGAAGAGCGAGAAGGAGAAAAGGAAGAGGAAATTGAGATCAAGGATGATCCAATGGCAAAGGCTGAAACAGAGGTGCTGCAACAGAATAACTAG 525 0.5695 MAAMMQGVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMRRLEAENRAAMQAAEDLHRKKAAEEREGEKEEEIEIKDDPMAKAETEVLQQNN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1768 174 CDD RRM_PPIE 13 85 IPR034168 GO:0003723
Dod02g1768 174 Gene3D - 3 154 IPR012677 -
Dod02g1768 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E 6 173 - -
Dod02g1768 174 Coils Coil 114 155 - -
Dod02g1768 174 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 89 IPR000504 GO:0003723
Dod02g1768 174 MobiDBLite consensus disorder prediction 127 165 - -
Dod02g1768 174 SUPERFAMILY RNA-binding domain, RBD 9 98 IPR035979 GO:0003676
Dod02g1768 174 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 82 IPR000504 GO:0003723
Dod02g1768 174 MobiDBLite consensus disorder prediction 127 174 - -
Dod02g1768 174 SMART rrm1_1 12 85 IPR000504 GO:0003723
Dod02g1768 174 PANTHER TRANSFORMER-2-RELATED 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1768 Dod-Chr2 22465331 22467853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1768 11 89 Eukaryotic Initiation Factors Gene Family AT3G11400 37.975 2.48e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1768 - - gmx:100809447 293.123