Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1757 ATGAGTATCCTTGAGCAGAAAAAACTCCAGCAAGCTGTTGAATGGCCTATTAAGCATTATGCTGCATTTTCAAGATTGGGAATATCCCCTGTACGTGGAATTCTTCTCCATGGACCTCCAGGATGTTCCAAAACAACCCTTGCCAAAGCTGCGGCACATGCTGCCCAAGCTTCTTTCTTTTCCTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAGGGGGAAGCTTTGCTTCGTAATACATTTCAGAGGGCACGACTTGCAGCACCCAGTATAATATTCTTTGATGAGGCTGATGTGGTGGCTACAAAACGGGGTGATAGTTCAAGCAATAGTTCTACAGTTGGTGAGAGGCTTTTGTCCACTTTGCTGACTGAGATTGATGGCTTAGAAGAATCCAAGGGAATTCTTGTCTTGGCTGCTACAAATCGCCCTTATGCAATTGATGCAGCACTCATGCGTCCTGGACGTTTTGATCTGGTTCTATATGTGCCACCGCCTGATTTGGATGCTCGATATGAGATACTTAGTGTTCATACACGTAAGATGAAAACAGGGAGTGACGTCAATCTCAGAAGACTAGCAGAAAATACAGAGCTCTTCACGGGTGCTGAACTGGAGGGACTATGCAGGGAAGCTGGAATTGTAGCTCTACGGGAAGACATATCTGCTACTGTTGTGTGTGACCGTCATTTCCAGACTGTGAAGAATTCTATAAAACCAGCATTAACAAAAGCTGAAATTGATTCATACTCATCTTTTATGAAGACCTCATCTCAGGCTTTGCCTAGGCATTTTGATTCAGGTTTGAAACCAGATAGGAACAAAAAGAACGGGTTGGGTTCTCTGTCATTGGTTAAAGTTGGTATCATTAGCTGCCTCTTAATTCTTGCTACTAAATACTGCGTCATGCACGGAGACCAAACTGCACGTGATATAGCAATGACCTGA 954 0.4361 MSILEQKKLQQAVEWPIKHYAAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVATKRGDSSSNSSTVGERLLSTLLTEIDGLEESKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLDARYEILSVHTRKMKTGSDVNLRRLAENTELFTGAELEGLCREAGIVALREDISATVVCDRHFQTVKNSIKPALTKAEIDSYSSFMKTSSQALPRHFDSGLKPDRNKKNGLGSLSLVKVGIISCLLILATKYCVMHGDQTARDIAMT* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1757 317 Pfam AAA+ lid domain 189 234 IPR041569 -
Dod02g1757 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 254 IPR027417 -
Dod02g1757 317 SMART AAA_5 30 169 IPR003593 -
Dod02g1757 317 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 6 240 - -
Dod02g1757 317 CDD AAA 30 167 - -
Dod02g1757 317 PANTHER AAA-FAMILY ATPASE 6 240 - -
Dod02g1757 317 ProSitePatterns AAA-protein family signature. 137 155 IPR003960 GO:0005524|GO:0016887
Dod02g1757 317 Pfam ATPase family associated with various cellular activities (AAA) 34 166 IPR003959 GO:0005524|GO:0016887
Dod02g1757 317 Gene3D - 169 260 - -
Dod02g1757 317 Gene3D - 4 168 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1757 Dod-Chr2 22220648 22223833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1757 6 255 Calmodulin-binding Proteins AT3G56690 47.200 1.73e-70 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1757 - - gmx:100814288 508.834