Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1689 ATGGTTGGCGGAGGAAAAGGTGAGAGACCGCCGTGGAGGGCTGCGGCTGGTGGCGGCGGCGGCGTCGGTGGGGAGGCACCACCGCAGAGACCGAGCATCAGTCTGCCGCAACGTGGCACCATGGAGAGCGTTTTCAACGGTGGTTTCTGCAGCCCTGGTCCGATGACCCTTGTCTCCAGCTTCTTCGCCGACGGTGGTGACGACTGCAAGTCATTCTCTCAGCTCCTCGCCGGTGCCATGGCTTCTCCGGCGGCAGGATCCACTGGCCTTCTTATTGATTCACCTTCCTTTTTTCAGCTTCCTCAGACACCCATAGGAATGTCACACCAGCAGGCACTAGCAGAGGTCACAGCTCAGGCAGCACAATCCCACTCAACTATGCATATCCAACCTCAACATTCATTATCTGCATCAGGCACTTCCAACACTAATCAACATCTGATGCCACCCTCGATGCCAAACTCTCAGGCAGCAATGCCAGAATCCACTGAGTATCCTCACTCTGATCAGCAAAGATTGGAGCCTTCTTTGCTGAATGTTGATAAGCCTGCTGATGATGGATACAACTGGAGGAAGTATGGTCAGAAACAGGTGAAGGGTAGCGAGTTTCCCCGGAGCTATTACAAGTGCACGTATGCAAACTGTCCTGTGAAGAAAAAGGTTGAGCGGTCGCTTGATGGCCACATAACCGCAATCATCTATAAAGGAGAGCACAATCACCAGCGCCCTCATCAGAACAAGCGCTCGAAAGATGCCATGAACTCGAGCGAAGGTTCGAATATGCAAGGGAATGCTGATTCAACTCATCAAGGGACAGGTGCTCATGCAGAATCTAGTCAGGCAACAGCTGAACATCTATCAGGAACAAGTGACAGTGAGGAAGTAGGTGATCATGAAACTGAAGTGGATGATAAAATTGTTGAGCCTGATCCCAAGAGGAGAAATACAGAGGTCACACACTCAGATCCAGCTTCTTCACACAGGACAGTCACAGAGCCGAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGCTATCGATGGCGCAAGTATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACACCGGGTTGTAATGTCCGGAAGCATGTTGAGAGAGCTTCAACTGATCGTAAAGCTGTCATAACAACATATGAAGGAAAGCATAACCATGATGTGCCAGCAGCTAAGACTAATAGTCACACAATTGCCAACAATAATGCATCACAATTGAAATCACAAAATGCCACAACTGAGATGCATAGCTTTGGCAGCAGGGGTATTGGGGGCAATGAGCAACAGCCTGTTGCACGTCTAAGGCTAAAGGAGGAGCAGATAACTTAG 1380 0.4942 MVGGGKGERPPWRAAAGGGGGVGGEAPPQRPSISLPQRGTMESVFNGGFCSPGPMTLVSSFFADGGDDCKSFSQLLAGAMASPAAGSTGLLIDSPSFFQLPQTPIGMSHQQALAEVTAQAAQSHSTMHIQPQHSLSASGTSNTNQHLMPPSMPNSQAAMPESTEYPHSDQQRLEPSLLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTYANCPVKKKVERSLDGHITAIIYKGEHNHQRPHQNKRSKDAMNSSEGSNMQGNADSTHQGTGAHAESSQATAEHLSGTSDSEEVGDHETEVDDKIVEPDPKRRNTEVTHSDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDRKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNATTEMHSFGSRGIGGNEQQPVARLRLKEEQIT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1689 459 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 26 87 - -
Dod02g1689 459 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 88 458 - -
Dod02g1689 459 ProSiteProfiles WRKY domain profile. 341 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 Pfam WRKY DNA -binding domain 347 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 Pfam WRKY DNA -binding domain 185 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 SUPERFAMILY WRKY DNA-binding domain 338 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 MobiDBLite consensus disorder prediction 124 172 - -
Dod02g1689 459 MobiDBLite consensus disorder prediction 252 289 - -
Dod02g1689 459 MobiDBLite consensus disorder prediction 1 38 - -
Dod02g1689 459 MobiDBLite consensus disorder prediction 233 251 - -
Dod02g1689 459 MobiDBLite consensus disorder prediction 290 321 - -
Dod02g1689 459 SMART WRKY_cls 346 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 SMART WRKY_cls 184 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 MobiDBLite consensus disorder prediction 422 441 - -
Dod02g1689 459 MobiDBLite consensus disorder prediction 422 459 - -
Dod02g1689 459 ProSiteProfiles WRKY domain profile. 185 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 MobiDBLite consensus disorder prediction 233 333 - -
Dod02g1689 459 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 87 IPR044810 GO:0003700
Dod02g1689 459 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 458 IPR044810 GO:0003700
Dod02g1689 459 SUPERFAMILY WRKY DNA-binding domain 182 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 Gene3D WRKY domain 176 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1689 459 Gene3D WRKY domain 331 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1689 Dod-Chr2 21168733 21174841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1689 30 459 WRKY Transcription Factor Family AT2G03340 52.539 7.30e-145 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g1689 WRKY 7.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1689 - - gmx:100799335 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1689 02 21168733 21174841 Dod02g1689 02 21168733 21174841 ECH