Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1683 ATGGAAGAAACAGAAGAGTCCACCAATGCTAACCAGAAACTCAACACCAAAAGGAGGAGCTTCAGGAATGGAGCAAACTCTCATGAGCACCATCATCGCCACCACCACCATCACTACTATCAGCAGCATCAGTTGCTACAGTGCTCAAGTCAACTTGGGTTCTGCAACAGCCAGAACAACAAGTATCAGAGATACTACCCAGCACTTCTTCCTCTACCTTCTCTTATACCCTTGCAACAACTTCCTTTGACTCCTCCTTTCCCTCAAAACCACTGCATCAAACCAAAAACCCATTTTCAGAAGCCTCCATGCAAACTCAATAGCTCTCCCTCATCAGATAACAAGCTCTCTGAACCGACACATGTTCCTGCTCCGAAGGAACTTCAGCAGCAAAGTAAGCCATCCTTTAAAGGAGATGATGGGAAGAAACTCAATCCTGCAAGGAAACCACAGGCAGTGATTGTTGCAAGGAGGCCAGACTCTGGTGGTAAAGAAGGTTCTGTGATCTCTCTACTTGCCAACCACTTTCTGGTGCAATTTGATTCATCACAAAAGATATATCAGTACAATGTTGAAATCACTCCTCACCCCTCCAAGGATGTTGCTAGGGTAATCAAACAGAAATTGGTCAATAATAATTCTGATGTGCTCTCTGGTGCTCAGCCAGCATATGATGGAAGAAAGAATCTTTACAGCCCAGTTGAGTTCCAAAATGACAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACAAGCAAATTGACATCACCTTATGGAGACATGTGTGACTTGAAGGAGAAGCATGAACAGCTGAAGCTTTTCAGGATAAATGTCAAACTAGTCTCTAAGATTAATGGGAAGGAGTTGGCTAATTACTTGAGCAAAGAGGGTGATGATTGGATTCCACTTCCACAGGACTATCTCCATGCTTTGGATGTAGTTTTAAGGCAAAGTCCAACTGAGAAGTGCATATCTGTAGGGAGGTCATTCTACTCGAGTTCAATGGGAAGAGGAAAAGATATTGGTGGGGGAGCCATTGGATTGAGAGGTTTCTTTCAGAGTCTTAGACCAACGCAACAAGGACTTGCTCTGAATGTAGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACTTGCAGAAACGACTCGAGTTTCTTCGAGACCTTTCTCAAAGGAAAACAACTCAGTTAACTGGTGAAGAGAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGATCTTTGTTTGCCACAGAGAAACTGTTCAAAGATACCGAGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGAGATGGAAGGAATCTGAGGCTTGTGAGTTACTTTAAAGATCACTATAACTATGACATACAATTCAGAAAGTTGCCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTCCTCGGTAAACTATCTGATGATCAAACAGCAAGAATACTCAAAATGGGATGCCAAAGACCAGGAGAACGAAAAACCATCATTGAAGGAGTCATGAGAGGGCCTGTTGGACCTACCAGTGGAGACCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGTGAGATGACAAGGTTGACTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGAGATGGAGGTCACGTTAGAAACCTCACTCCTTCACGTCACGATCGGCAATGGAACCTTCTAGATGGCCATGTTTTCGAAGGAACTAAAATTGAAAGGTGGGCACTAATTAGTTTTGGTGGTACCCCTGAGCAGAAGTCCAATATCCCCAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGCATGTATCTCAACAAGAGCACAGTTATAAGTCCCCAATTTGAGTCAAGCCAGGTTCTGAACAATGTCACTCTTCTAGAATCCAAGCTCAAAAAGATCCAGAGGACTGCCTCAAACAACCTCCAGCTTCTTATTTGTATAATGGAGAGAAAACACAAAGGGTATGCAGACCTGAAAAGAATTGCTGAGACAAGTGTTGGTGTTGTGAGCCAGTGTTGCCTGTACCCAAATCTGAGCAAGCTAAGCTCACAATTTCTGGCTAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCACTCTACAACTCATTGCCTTCTCAAATACCACGCCTCCTTCGGATCGATGAGCCAGTGATATTCATGGGTGCTGATGTGACACATCCTCATCCTCTTGATGATTTCAGTCCATCTGTTGCAGCTGTTGTTGGTAGCATGAACTGGCCGTCGGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACACAGACAAGAAATCATCCAGGATCTTGGTGCAATGGTGGGGGAGTTGCTTGATGACTTTCATCAGGAAGTAGAGAAACTCCCCAGCAGAATAATCTTCTTCAGAGATGGGGTTAGCGAGACTCAATTCTACAAAGTGCTGCAAGAGGAGCTGCAGTCTATCAGATGGGCATGTTCAAGGTTTCCTGGCTATAAACCTCTTATTACTTTTGCAGTGGTGCAGAAGAGGCATCACACAAGATTGTTCCCCTTTGAAACTGACCAGTCTTCGACTCAGAACCATTTTTCGTATGAGAATATCCCTCCAGGGACAGTAGTGGACTCTGTGATCACTCATCCAAAGGAATTTGATTTCTATCTGTGCAGCCATTGGGGTGTGAAAGGAACAAGCAGGCCAACTCATTACCATATCTTGTGTGATGAAAACCAGTTCACCTCAGATGAACTCCAGAAGCTGGTTTACAATCTGTGCTACACTTTTGTTAGGTGTACCAAGCCAATTTCTTTGGTCCCTCCAGCATATTATGCACATTTGGCTGCATATAGAGGGAGACTCTACCTTGAGAGATCAGAGTCCTTAGGCTTGTTTAGAAGTACACCTACATTGTCCAGAGCTGCTCCTCCTACGACAGCACCTCTACCTAAACTTAGTGAAAACATCAAGAAGCTAATGTTCTACTGCTAG 3066 0.4384 MEETEESTNANQKLNTKRRSFRNGANSHEHHHRHHHHHYYQQHQLLQCSSQLGFCNSQNNKYQRYYPALLPLPSLIPLQQLPLTPPFPQNHCIKPKTHFQKPPCKLNSSPSSDNKLSEPTHVPAPKELQQQSKPSFKGDDGKKLNPARKPQAVIVARRPDSGGKEGSVISLLANHFLVQFDSSQKIYQYNVEITPHPSKDVARVIKQKLVNNNSDVLSGAQPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLTSPYGDMCDLKEKHEQLKLFRINVKLVSKINGKELANYLSKEGDDWIPLPQDYLHALDVVLRQSPTEKCISVGRSFYSSSMGRGKDIGGGAIGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLTGEERKEVEKALKNIRIFVCHRETVQRYRVYGLTEEATENLWFADRDGRNLRLVSYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGPVGPTSGDQEREFKLQVSSEMTRLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGMYLNKSTVISPQFESSQVLNNVTLLESKLKKIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLLRIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPSANKYISRIRSQTHRQEIIQDLGAMVGELLDDFHQEVEKLPSRIIFFRDGVSETQFYKVLQEELQSIRWACSRFPGYKPLITFAVVQKRHHTRLFPFETDQSSTQNHFSYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHILCDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTPTLSRAAPPTTAPLPKLSENIKKLMFYC* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1683 1021 Gene3D paz domain 370 497 - -
Dod02g1683 1021 MobiDBLite consensus disorder prediction 92 152 - -
Dod02g1683 1021 CDD Piwi_ago-like 541 981 IPR045246 -
Dod02g1683 1021 SMART Piwi_a_2 672 982 IPR003165 GO:0003676
Dod02g1683 1021 Pfam Piwi domain 673 979 IPR003165 GO:0003676
Dod02g1683 1021 Pfam PAZ domain 387 509 IPR003100 GO:0005515
Dod02g1683 1021 Pfam N-terminal domain of argonaute 169 315 IPR032474 -
Dod02g1683 1021 PANTHER PROTEIN ARGONAUTE 7 108 1020 - -
Dod02g1683 1021 SUPERFAMILY Ribonuclease H-like 657 982 IPR012337 -
Dod02g1683 1021 Gene3D - 558 734 - -
Dod02g1683 1021 CDD PAZ_argonaute_like 380 492 - -
Dod02g1683 1021 MobiDBLite consensus disorder prediction 102 135 - -
Dod02g1683 1021 SUPERFAMILY PAZ domain 371 529 IPR036085 GO:0005515
Dod02g1683 1021 SMART PAZ_2_a_3 384 515 IPR003100 GO:0005515
Dod02g1683 1021 Pfam Argonaute linker 1 domain 325 374 IPR014811 -
Dod02g1683 1021 ProSiteProfiles Piwi domain profile. 672 982 IPR003165 GO:0003676
Dod02g1683 1021 ProSiteProfiles PAZ domain profile. 384 493 IPR003100 GO:0005515
Dod02g1683 1021 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 108 1020 - -
Dod02g1683 1021 SMART DUF1785_2 324 376 IPR014811 -
Dod02g1683 1021 Gene3D - 744 1021 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1683 Dod-Chr2 21088044 21093111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1683 111 1021 Eukaryotic Initiation Factors Gene Family AT1G48410 40.814 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1683 K11593 - gmx:100797755 1815.05