Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1678 ATGAGCTCCTCCGGCTTCGGAGGCGGCGACTCTTCCGGCGAGACGGCGGAGGCGAAGCAGCAGAAGGAGAAGGATAAGGAGAAGGCGAGGATGAGCAGGACGTCGCTGATCCTGTGGCACGCACACCAAAACGACGCCGCTGCTGTTCGGAAGCTTCTAGAAGAGGATCCCTCGCTGGTGAAGGCCAGGGACTACGACAACCGCACTCCGCTCCACGTGGCCTCCCTCCATGGCTTGGTCGACGTCGCCAACTGCCTGATCGAGTTCGGCGCCGACGTCAACGCCCAGGACCGTTGGAAAAACACCCCTCTGGCTGATGCAGAAGGAGCTAATAGGACTGCAGTGATTGAGCTTTTGAAATCGCATGGAGGCTTGTCTTTTGGCCAAAATGGAAGCCATTTTGAACCAAAGCCTATTCCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTTGACCCTACTGAGCTGGACTTCTCAAATTCAGTTTGTATTGGAAAGGGATCTTTTGGTGAGATTTTGAAAGCTCATTGGCGTGGCACACCTGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAAGCTTCGACACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACCGATAGGAAGCCCCTAATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATAAATACCTTAAGGGAAAAGGTTCACTCAGTCCTTCAACAGCAATCAACTTTGCCTTGGATATTGCCAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTCAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGCGCTGACCATTTAAAAGTTGGAGATTTTGGGCTCAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACTGGCGAAACTGGAAGCTACCGCTATATGGCTCCTGAAGTTTTCAAGCATCGGAGATATGATAAGAAGGTTGATGTTTTCTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATTTAGAACCTTATGAGGGAGCCAAATACGTGTCCGAAGGACATAGGCCGACTATTCGAGCAAGGGGTTATGTCCCCGATCTAAGAGAGTAA 1182 0.4763 MSSSGFGGGDSSGETAEAKQQKEKDKEKARMSRTSLILWHAHQNDAAAVRKLLEEDPSLVKARDYDNRTPLHVASLHGLVDVANCLIEFGADVNAQDRWKNTPLADAEGANRTAVIELLKSHGGLSFGQNGSHFEPKPIPPPLPNKCDWEVDPTELDFSNSVCIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHKYLKGKGSLSPSTAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFANLEPYEGAKYVSEGHRPTIRARGYVPDLRE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1678 393 SUPERFAMILY Ankyrin repeat 37 124 IPR036770 -
Dod02g1678 393 Gene3D - 9 132 IPR036770 -
Dod02g1678 393 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 17 393 - -
Dod02g1678 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Dod02g1678 393 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Dod02g1678 393 CDD STKc_MAP3K-like 164 382 - -
Dod02g1678 393 MobiDBLite consensus disorder prediction 16 31 - -
Dod02g1678 393 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Dod02g1678 393 Pfam Ankyrin repeats (3 copies) 33 97 IPR002110 GO:0005515
Dod02g1678 393 Pfam Protein tyrosine and serine/threonine kinase 163 381 IPR001245 GO:0004672|GO:0006468
Dod02g1678 393 ProSiteProfiles Protein kinase domain profile. 158 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1678 393 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 393 - -
Dod02g1678 393 Gene3D Transferase(Phosphotransferase) domain 1 149 393 - -
Dod02g1678 393 SUPERFAMILY Protein kinase-like (PK-like) 157 382 IPR011009 -
Dod02g1678 393 MobiDBLite consensus disorder prediction 1 31 - -
Dod02g1678 393 ProSitePatterns Protein kinases ATP-binding region signature. 164 185 IPR017441 GO:0005524
Dod02g1678 393 PIRSF ILK 2 393 - -
Dod02g1678 393 SMART ANK_2a 66 95 IPR002110 GO:0005515
Dod02g1678 393 SMART serkin_6 158 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1678 Dod-Chr2 21018205 21025376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1678 3 393 MAP Kinase Kinase Kinase AT1G14000 83.632 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dod02g1678 PK_Tyr_Ser-Thr 3.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1678 - - gmx:100789273 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1678 02 21018205 21025376 Dod02g1678 02 21018205 21025376 ECH