Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1669 ATGGGTAGGACCCCATGCTGTGAGAAGAAAGGGTTGAAGAGAGGAGCATGGACTCCGGAAGAAGACAAGAAGCTAGCGGCTTATGTTGAAGAACATGGCCATGGAAGCTGGCGTTCATTGCCTGCAAAAGCTGGTCTTCAAAGATGTGGGAAGAGTTGTAGATTGAGGTGGATCAACTACCTCAAACCTGATATAAAACGAGGAAACTTCAGCTTGGAGGAAGACCGCACCATCATTCAACTCCATGCCTTTCTTGGGAACAAATGGTCATTGATAGCAGCTCACTTGCACAATAGAACAGACAATGAGATCAAGAACTACTGGAACTCCCACCTCAAGAAAAGGCTCATCAGGATGGGCATAGACCCAACCACCCACAAGCCAAAAGCCAACACAACAGGCCACAACTCCAAGGATGCTGCCAATATGAGCCACATGGCTCAGTGGGAGAGTGCTAGGCTCCAAGCTGAAGCCAGAGAATCCATGTTGCAGGCTGGATCCTCCTCCTCCTCCTCCTCCCATCCAACTAAGTTAACCATAAGCAAAATCCCACCTAAACCTTCACCACCACCATGCCTAGATGTGCTCAAAGCATGGCAACAAAGCTTAGGGTCATTAGAGTCACCATCAACAAATCACCACAACAACAACACAATGTATAACATGTATGCCATCATGCTTGCCACTGATAATAATGACCTTCATTCACCGGTATCCACTTTGAGCTTCCCTGAAAGCAAGAAGCTTCCTACTGTCTCTAGCACTGATGCTTGTCAATCAGCCAAAAGCGGCTCATCACTCTCATTTGAGAATCATGATGGTTATCGTAATGTGGACACCAGTAGTCATAAAATGACGGAAGGCATTGTGTGTAGCACGCAAGATGATGACATTATGGTGGCCGTGGAAGCATTTCGAGCAGCAAGGCGGCGTGATGAGGGTATTTCGGAAGTCCCTAATGGTGCCATTATTGAAGGTATCAATAATCATATGCCGGTTTTTGAATGTTTAGCAGAAGAGTATGGATACGGGAACTTCAACTTGGAGGCCCATTACTGCTGGAACAGTTAA 1071 0.465 MGRTPCCEKKGLKRGAWTPEEDKKLAAYVEEHGHGSWRSLPAKAGLQRCGKSCRLRWINYLKPDIKRGNFSLEEDRTIIQLHAFLGNKWSLIAAHLHNRTDNEIKNYWNSHLKKRLIRMGIDPTTHKPKANTTGHNSKDAANMSHMAQWESARLQAEARESMLQAGSSSSSSSHPTKLTISKIPPKPSPPPCLDVLKAWQQSLGSLESPSTNHHNNNTMYNMYAIMLATDNNDLHSPVSTLSFPESKKLPTVSSTDACQSAKSGSSLSFENHDGYRNVDTSSHKMTEGIVCSTQDDDIMVAVEAFRAARRRDEGISEVPNGAIIEGINNHMPVFECLAEEYGYGNFNLEAHYCWNS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1669 356 MobiDBLite consensus disorder prediction 153 189 - -
Dod02g1669 356 CDD SANT 69 112 IPR001005 -
Dod02g1669 356 CDD SANT 16 61 IPR001005 -
Dod02g1669 356 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dod02g1669 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod02g1669 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dod02g1669 356 PANTHER TRANSCRIPTION FACTOR MYB106 1 253 - -
Dod02g1669 356 MobiDBLite consensus disorder prediction 161 179 - -
Dod02g1669 356 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod02g1669 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 253 - -
Dod02g1669 356 Gene3D - 14 66 - -
Dod02g1669 356 SMART sant 13 63 IPR001005 -
Dod02g1669 356 SMART sant 66 114 IPR001005 -
Dod02g1669 356 Gene3D - 69 116 - -
Dod02g1669 356 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod02g1669 356 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Dod02g1669 356 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1669 Dod-Chr2 20893138 20894674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1669 1 159 MYB Transcription Factor Family AT3G01140 76.074 1.79e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g1669 Myb_DNA-binding 4.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1669 K09422 - gmx:100809025 342.428