Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1667 ATGGAGAGCAGAACAGGCTCTGAACTCCCACCTGGATTCAGGTTCCACCCCACAGATGAGGAACTAATCGTGTACTACCTTTGTAACCAAGCCACATCAAAGCCGTGCCCTGCATCTATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTGCCTGAAAAAACAAACTTTGGAGAAAATGAATGGTACTTCTTTACCCCAAGAGACAGGAAGTATCCTAATGGGGTTAGGCCTAATAGAGCAACAGTGTCCGGATATTGGAAGGCTACTGGCACAGACAAGGCAATCTATAGTGGGTCGAAGCATGTTGGGGTGAAGAAAGCTTTGGTCTTTTACAAGGGTAAGCCCCCAAAGGGCATAAAGACAGATTGGATCATGCATGAGTATAGGTTGGTTGGATCAAGAAGACAAACCAGCAAGCAAATTGGGTCCATGAGACTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGGGAAATCATTGTTGGAGCCTAAAGAGGAATACCCCACAGCCCAAATCAATATAACAGCAGCAAATGATGGGAATGAACAGGAAATGTTGAAATTCCCAAGGACTTGTTCCCTTACTCATCTTTTGGATATGGACTACTTGGGCCCAATATCACAGATGATATCTGATGGATCATATAACTCAACCTTTGATTTCCAACTAAACACTGCCAATGTTGGAATAGACCCTTTTGTAAGACCTCAGCTGCCTGAAATGCCTAATCCTTATGCAGCAGATTCAGGGAATCACCATATGAAACAGAACAGCACCATCAACCCCACTATATTTGTGAACCAACTGTTTGATCAGAGTGGATAA 849 0.4358 MESRTGSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPEKTNFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPPKGIKTDWIMHEYRLVGSRRQTSKQIGSMRLDDWVLCRIYKKKSMGKSLLEPKEEYPTAQINITAANDGNEQEMLKFPRTCSLTHLLDMDYLGPISQMISDGSYNSTFDFQLNTANVGIDPFVRPQLPEMPNPYAADSGNHHMKQNSTINPTIFVNQLFDQSG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1667 282 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Dod02g1667 282 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Dod02g1667 282 PANTHER NAC TRANSCRIPTION FACTOR 56 6 236 - -
Dod02g1667 282 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 6 236 - -
Dod02g1667 282 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Dod02g1667 282 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1667 Dod-Chr2 20829700 20831302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1667 1 217 NAC Transcription Factor Family AT1G69490 68.559 8.36e-115 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g1667 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1667 - - gmx:732552 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1667 02 20829700 20831302 Dod02g1667 02 20829700 20831302 ECH