Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1659 ATGAGCTCACTCGTGGAACTGCCCCTCCAATTCCTCTTCCGTCAGAACCCCAACAGCAACACCAACCCAATCCCCAAACCCTTCCAATACCCTAATCTCATCCAATCCCAATTCCGGCCCCAATTTTCCCGGGAAACAAACACCACCACCTCCTCCTCAGACCGCGGCCTCATTTTCCGGGAAAAAGTCCTCTACCTCGAGAAGCTCAACGTGAGCCCCCAAAAGGCCTTCCGAGTAAACCCTAACCTCCGATCCACCCCCCTCTCCACCCTCAAATCCGTCGAGCAATGCCTCTCCTCCATGGGGATCCCCCGCTCCGCCATGGGCAGAATCCTCGACATGCTCCCCGACCTCCTCAACCGCGACCCCAACACCGACCTCTACCCAATCCTCGATTTCCTCCTCAACGAGGTCGGGATCCCTTACCCTGACGTCCGAAAATCCATCACCCGCTGCCCTAGGATCTTGCTCTGCAGCGTGGAGAATCAGTTGAGACCAACGCTTTCTTTCCTCAAGGAGGAATTAGGGTTCACCGGATCGTATTCCCTCACGTGCCAGAACACGGTGCTTCTTGTTTCGAGCGTGGAGGGGACCTTCGTGCCGAAGATAGAGTTCCTGAAGGGGCTGGGGCTGACGCGTGTGGAGGTCAGGAACATGGTTGTGAGGTCCCCTGGGCTGTTGACGTTTAGCATAGAGAAGAATCTGAGGCCGAAGAGTGAGTATTTCTTGAAGGAGATGAATGGGGAAGTTGCGGAGCTGAAGAGGTTCCCGCAGTATTTTTCATTTAGCTTGGAACGGAGGATCAGGCCAAGGCATAGGTTGCTTGTTCAGCACGGGTTGAGCCTCCCTTTGCATATCATGTTGATGGGTGATGAGGGCGGCTTTCATGAAACGCTGTTTACCACGCGGTTGAGGAAACTTGAGTGA 927 0.5469 MSSLVELPLQFLFRQNPNSNTNPIPKPFQYPNLIQSQFRPQFSRETNTTTSSSDRGLIFREKVLYLEKLNVSPQKAFRVNPNLRSTPLSTLKSVEQCLSSMGIPRSAMGRILDMLPDLLNRDPNTDLYPILDFLLNEVGIPYPDVRKSITRCPRILLCSVENQLRPTLSFLKEELGFTGSYSLTCQNTVLLVSSVEGTFVPKIEFLKGLGLTRVEVRNMVVRSPGLLTFSIEKNLRPKSEYFLKEMNGEVAELKRFPQYFSFSLERRIRPRHRLLVQHGLSLPLHIMLMGDEGGFHETLFTTRLRKLE* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1659 308 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 40 307 - -
Dod02g1659 308 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 SMART mt_12 109 141 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 SMART mt_12 146 178 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 SMART mt_12 74 104 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 SMART mt_12 217 249 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 Pfam mTERF 135 289 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 Pfam mTERF 97 177 IPR003690 GO:0003690|GO:0006355
Dod02g1659 308 Gene3D Transcription termination factor 3, mitochondrial 65 307 IPR038538 -
Dod02g1659 308 PANTHER CGI-12 PROTEIN-RELATED 40 307 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1659 Dod-Chr2 20640495 20646962 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod02g1659 mTERF 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1659 K15032 - gmx:100785219 349.747