Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1657 ATGGAAAAGATGCAAAATCAAAGTGTGCATTTTGTTCTATCCACTGATGCCAAACCAAGGCTGAAATGGACTCCTGAGCTTCACCAAAGATTCATTGAGGCAGTTAATCAGCTTGGAGGTGCAGATAAAGCAACCCCAAAGAGCCTTATGAGAGTGATGGGGATTCCAGGCCTTACTTTGTACCACCTGAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAGCTAGAAACCTGCTCTGACAACAAACAAGAAGATTACAGTGAAATCAAGAGCTGTGATGGTCACTGCAGCAAGGAGAACAGTGTTGGGGCCCAGAAACAAATTACAGAAAACTTGAAGGTTGCTCAGGCTCTCCAAATGCAAATGGAAGTACAAAGGAAACTTCATGAACAAATTGAGGTGCAGAAACACCTGCAGCTTAAAATTGAAGCTCAAGGGAAATATTTACAATCAGTGCTAAAGAAGGCACAGGAAGCACTTGCAGGATACGATTCTTCCACAGGAGGTCTAGAACTCACAAAAGCTGAACTTTCTCAGCTTGTTACAATAATCAACAATGCTTGTCCAAGTTCCCCCATCTCAGAGCTGACTGAAAATAGAGGATTGAGTTTGAAAAGTGAGGAGGGTAAACAAGACAAAGGAACCATGTTTTCATTGGAAAGTTCTTTGACATCTTCTGAAAGCTGTGAGAGAAAGGAAGAAATGGGGGACTTGAAAAATTCCAACACTATTTCACTTGAATTGCCCTTATTGGCCATTAATCACACACAAGCTAAAGCATCAAGTGGAGATTCAAGTAATGAAGCTAGTGGAAGAAAGAGAAGTGCAGCAACTGATTCTGAGGGTTGCTGTGTTGAGCAACCATCTGGTAAAAGATGTGGCAACAAGTTGAGGAAACCTGAGTTGTCACAAATGCTTGACTTGAACTATCAGTATCATGGTGACATGGACTCAAGTACAAAAACATTAGACTTAAATTGTAGTTCAAGCTTTGGGGAACCATGA 1014 0.4122 MEKMQNQSVHFVLSTDAKPRLKWTPELHQRFIEAVNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQLETCSDNKQEDYSEIKSCDGHCSKENSVGAQKQITENLKVAQALQMQMEVQRKLHEQIEVQKHLQLKIEAQGKYLQSVLKKAQEALAGYDSSTGGLELTKAELSQLVTIINNACPSSPISELTENRGLSLKSEEGKQDKGTMFSLESSLTSSESCERKEEMGDLKNSNTISLELPLLAINHTQAKASSGDSSNEASGRKRSAATDSEGCCVEQPSGKRCGNKLRKPELSQMLDLNYQYHGDMDSSTKTLDLNCSSSFGEP* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1657 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 334 IPR044848 GO:0003700
Dod02g1657 337 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 334 - -
Dod02g1657 337 MobiDBLite consensus disorder prediction 261 276 - -
Dod02g1657 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Dod02g1657 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 73 IPR006447 GO:0003677
Dod02g1657 337 MobiDBLite consensus disorder prediction 261 301 - -
Dod02g1657 337 Pfam MYB-CC type transfactor, LHEQLE motif 116 161 IPR025756 -
Dod02g1657 337 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Dod02g1657 337 Pfam Myb-like DNA-binding domain 20 71 IPR001005 -
Dod02g1657 337 Gene3D - 17 75 - -
Dod02g1657 337 MobiDBLite consensus disorder prediction 207 243 - -
Dod02g1657 337 MobiDBLite consensus disorder prediction 316 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1657 Dod-Chr2 20595714 20597647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1657 11 295 G2-like Transcription Factor Family AT1G69580 48.571 1.02e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod02g1657 Myb_DNA-binding 3.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1657 - - gmx:100784670 489.96