Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1636 ATGGAAGAGAGAAATGATAGTGAGAAACTTGATGAAGTTTTGCTACCAGGTTTCAGGTTCCATCCGACTGATGAAGAGCTTGTTGGATTTTACCTCAGGAGAAAGATTCAGCAACGGCCTCTATCCATTGAGCTCATCAAGCAGCTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGTTGGCCATCACAGGAGAGAAAGAGTGGTATTTCTACTGTCCCAGGGATAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAGGCCACAGGGACTGACCGGCCTATATACTCCTCAGAGGGTTCCAAGTGTATTGGTCTAAAGAAATCTCTAGTGTTTTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCAGGCTACCTTCCCTCACAGATTCACTGTCCCCGAAGAAGTGCATGGACAACAAGACCATTCCAGCTAATGAATCTTGGGCAATCTGCAGGATATTCAAGAAAACCAACTCTACAGCACAAAGAGCTCTCTCTCACTCTTGGGTCTCTTCTCTACCTGAACCAAGCACCTCTGATATGCTAACCAAAGATCAAGACAACAACACACAGTTTTGTTCAGCCAACATGCCATTAACAAAGAAGAATTTCCTAGCTAGCCAGTTCTATACTAACAACGACAATGACACCCAAAACTCAACCACAAATAGCATTAGTAATCTTTGTCCTTTAGATGTTGCCTCTTACAAACCCATTATCAATCCATTGCTTTACAAAGCATTCGATCATCTACCTTTTTCAAATGGGGACCTTAGCAATAGCTTGGTCTTCTCATCTCCCCTTGAAACATCAAATACTAGTGCCAAACCTACAATTGATGTTTCTTCCATGTTGTTCAGCATGTCGCCCTCTATGCTTGGAGATCTTAGTAAGAACTCTGAGGGTTCAACAACTACAAACTTTGGTGGGTTGCAAGAGCAATGTAGTGGCTACCCAATACCATTAACGCAAGGGACACTTGGAAACCAATATGATAGTGCGTTGGTAAAGTACTTTCCTAATGTGAATGTGCCTCGTGTTGATGACCAAGGTTTGGAGACATTGCGATCCGTTGGGTTTCCATTCGGAATGCCTTTCAATATTGGCGATGCATGGAAGTCAAATAATGTGCATTGGGATGCTTCCTCTTGTCCTTGTGATGTGCCTTCTAGTTATTCCACAACTAAGTGCTACAATTAG 1251 0.4269 MEERNDSEKLDEVLLPGFRFHPTDEELVGFYLRRKIQQRPLSIELIKQLDIYKYDPWDLPKLAITGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKKCMDNKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLPEPSTSDMLTKDQDNNTQFCSANMPLTKKNFLASQFYTNNDNDTQNSTTNSISNLCPLDVASYKPIINPLLYKAFDHLPFSNGDLSNSLVFSSPLETSNTSAKPTIDVSSMLFSMSPSMLGDLSKNSEGSTTTNFGGLQEQCSGYPIPLTQGTLGNQYDSALVKYFPNVNVPRVDDQGLETLRSVGFPFGMPFNIGDAWKSNNVHWDASSCPCDVPSSYSTTKCYN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1636 416 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Dod02g1636 416 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Dod02g1636 416 PANTHER PROTEIN FEZ ISOFORM X1 1 414 - -
Dod02g1636 416 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 414 - -
Dod02g1636 416 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Dod02g1636 416 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1636 Dod-Chr2 20381561 20383307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1636 1 260 NAC Transcription Factor Family AT1G26870 65.556 3.19e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g1636 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1636 - - gmx:100783995 613.224