Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1601 ATGGGTAACTGTTTAGATTCTTCTGCAAAAGTTGATGAAGCTCAGAGCAGTAGAACCACTTCTGCAATCTCGAAAACTACTCCTTCCAGCTTATCCATTCCATCATACAGTGAGAAAAGCAATGCTTCAACTCTTCCCACCCCAAGGTCGGAGGGTGAAATCTTGCCTTCTCCTAATCTTAAGGCCTTTACATTCAATGAGCTGAAGAATGCCACCAGAAATTTTCGGCCCGACAGTCTTCTTGGTGAAGGGGGATTTGGCTATGTTTATAAAGGATGGATTGATGAGCACACATTTCTGCCTTCAAAACCTGGGTCAGGAATGGTTGTTGCTGTAAAGAAGCTTAAGCCCGAAAGCTTTCAAGGTCATAAGGAGTGGTTGACTGAGGTTAAGTACCTTGGGCAACTGCACCATCCTAATCTGGTTAAATTAATTGGTTACTGCTCTGAGGGAGAGAACCGGCTAGTTGGTCTATGA 477 0.4403 MGNCLDSSAKVDEAQSSRTTSAISKTTPSSLSIPSYSEKSNASTLPTPRSEGEILPSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFLPSKPGSGMVVAVKKLKPESFQGHKEWLTEVKYLGQLHHPNLVKLIGYCSEGENRLVGL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1601 158 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 11 156 - -
Dod02g1601 158 ProSitePatterns Protein kinases ATP-binding region signature. 81 114 IPR017441 GO:0005524
Dod02g1601 158 SUPERFAMILY Protein kinase-like (PK-like) 51 153 IPR011009 -
Dod02g1601 158 MobiDBLite consensus disorder prediction 9 50 - -
Dod02g1601 158 Pfam Protein tyrosine and serine/threonine kinase 79 154 IPR001245 GO:0004672|GO:0006468
Dod02g1601 158 MobiDBLite consensus disorder prediction 1 56 - -
Dod02g1601 158 PANTHER OS01G0588500 PROTEIN-RELATED 11 156 - -
Dod02g1601 158 Gene3D Phosphorylase Kinase; domain 1 47 156 - -
Dod02g1601 158 ProSiteProfiles Protein kinase domain profile. 75 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1601 Dod-Chr2 19757068 19758694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1601 61 156 Glycoside Hydrolase AT3G07070 48.958 3.34e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g1601 PK_Tyr_Ser-Thr 5.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1601 - - gmx:100809778 288.115