Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1600 ATGCCAAAAGGGAGCTTGGAGAATCATCTATTTAGGAGAGGACCACAGCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCGTCGGTGCTGCCAAAGGAGTCTCTTTTCTTCATAATGCCAAATCACCAGTCATATACCGTGATTTTAAAGCTTCTAACATCCTGCTGGATGCTGAGTTCAATGCTAAACTATCTGATTTCGGCTTAGCAAAGGCTGGTCCTACTGGTGATAGAACTCATGTGTCTACTCAAGTCATGGGTACTCAAGGATACGCAGCGCCTGAATATGTTGCAACCGGTCGGCTAACGGCTAAAAGTGACGTATATAGCTTTGGGGTTGTGCTGCTTGAACTATTGTCTGGAAGACGCGCTGTTGATAAAGGAATATCCGGCATGGAGCAGAATCTGGTGGACTGGGCAAAACCATATTTGGGTGACAAACGAAGGTTGTTCCGGATTATGGATACGAAGTTGGAGGGGCAATACCCACAAAAAGCAGCCTTCATGGCTGCTACACTTGCGCTACAATGCCTAAACAGTGAGGCCAAGGCAAGGCCTACAATGACAGAGGTTTTAGCAACTCTGGAACAGGTAGAATCCCCCAGAAACGCGGGTCGAAATTCCCAATTCGAACATCAGAGAGTCCACACTCCTGTAAGACGGTCTCCTGCACGAAACCGGTCGCCTCTAAACTTGACTCCAACTGCATCCCCGCTGCCATCTCACCGGCAGTCCCCTTGCCCGCACTAA 750 0.4893 MPKGSLENHLFRRGPQPLSWSVRMKVAVGAAKGVSFLHNAKSPVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKGISGMEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKAAFMAATLALQCLNSEAKARPTMTEVLATLEQVESPRNAGRNSQFEHQRVHTPVRRSPARNRSPLNLTPTASPLPSHRQSPCPH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1600 249 PIRSF ILK 1 213 - -
Dod02g1600 249 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 1 247 - -
Dod02g1600 249 SUPERFAMILY Protein kinase-like (PK-like) 1 195 IPR011009 -
Dod02g1600 249 MobiDBLite consensus disorder prediction 197 212 - -
Dod02g1600 249 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1600 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Dod02g1600 249 PANTHER OS01G0588500 PROTEIN-RELATED 1 247 - -
Dod02g1600 249 Gene3D Transferase(Phosphotransferase) domain 1 1 221 - -
Dod02g1600 249 Pfam Protein kinase domain 2 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1600 249 MobiDBLite consensus disorder prediction 197 249 - -
Dod02g1600 249 MobiDBLite consensus disorder prediction 224 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1600 Dod-Chr2 19755580 19757063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1600 1 195 Glycoside Hydrolase AT3G07070 56.566 1.40e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g1600 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1600 - - gmx:100809778 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1600 02 19755580 19757063 Dod02g1600 02 19755580 19757063 ECH