Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1594 ATGAGTGCGCCAGGGAAGATCGCGGAAGGGCATGCGGCGGTTCGCGCGGTGGCTAGGTTGATGGAGGCCGCAACTGAGGCTATGGCTGCTTGTGAGGCAGATCTGAGTCAAAATCTGAAGGCTTTAGTATATAAGAAGGCCATACTCACGCCATATTCGTATGGTGAAAAGTTGTCGCGACCTAAAAGCTGTATAGGAAGCTCTATTTCGAAAGATACAAATATGGAAGATCATCCTATTATCTTGGAGTCTAACCGTGAAGAAGAGATTGGTAGCATTAAGGATCAAAATCTTGGATCAACCAAGGGTGAAATGGGAGAGGTTAGGGAAGAAGATGGGAGGTTGAAGTTCTTATTGGCAAGCCTTGTAAAGGACTACCAATCACTACAAACAAAATTCATTGACACCCTTCAACAAGATAAACCAATTACTCGTCAAGAGGCTACCAAAGTTTCAGGTAAATCAATTGCTCTTGAAGAATGTGATGAACTTGTGACTCTTTCTCTAGGTGTGTCACCCAAAGACCACCCTACCAAGGACGGGAAAAAGATCAATAGCAATAACAGAATTCAAGAAAAGAGAGAAGATGATATTGATGATGAGGATTTGGATAAAGGGCTTGCACTTGGGTTAGATATAAGATTTGACCCTTCACCTCAAGCTGGAGCTACAAATGATCCTAATAGCCCAGAAAGTAGCTTTGTGGAGGAAGGGAAGGAAGAGGAACCAGCTGAGATTTGGCCACCCAGTAAAGTTCTAAAGACAATCAAAGCTGGGGATAAAAGTGGAGCTTCTAATCAACAAAATCAGCACAAGAAGGCTAGGGTTTCTATTAGAGCCAGATGTGATACACAAACGATGAATGATGGATGCCAATGGAGAAAATATGGCCAGAAGATAGCAAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGTACAGTTTCTCCATCTTGTCCTGTAAGAAAACAGGTGCAAAGATGTGTTGAGGATATGTCCATCTTGATTACCACCTATGAAGGAACACACAATCACCCACTTCCTATTTCAGCCACTGCTGTGGCCTCCACAACTTCTGCAGCTGCTTCCATGCTTCAGTCTCCCTCAATGAGTTCACAACAAGGACAAACCGATTCAGATATAGCAGCACCCATTGTCAATTCCCTAGCTGCTTACAACCCTAATGCTTTAAACTTCTCTACATGCCAAATGTCAAGTCCACACCAATTCAATTTCCCCAACTCTTCAATTTCAACCTCAAATAATTCTCACCCTACAATTACTCTTGACCTTACTGCACCACCAACTCCCTCTCATTCGGGAAATTTTACCTCAGGCGTCTCTTACACACCAAAATATTCATCAACAGACCTCAATTTTTCATCAATCTTCTCTCATCCTCTACAATCTAGCATACAACCACATTCACCCTGGAGCACTTATAGTGGTTATTTCAACTCTGGAACATTAACACAAAATCGAAACCAAGGTTTTTACATCATAAACAGTGGTTCACAACCATTTCAAGGGCATCTCCATCAACCTATCTACATGAGCAATCACAACAATTCTCAACATCATCCTTTGTCAGATAACATTGCTACTGCAACCAAGGCAATCACAGCCAACCCAAAATTTCAATCAGCATTAGCTACTGCTCTTACAACATATGTTGGAAATGCAGGAGCTTCTGGTGGTAGCCTAAGAGAAAACCATCATGTTGGCGAGAGTGCACCATTGATGAATTTGAAGCTAAGTAGTGAAGATGTGTCCTACACTTCTAGCAAAAATGGCATAGGATGTGCACCATCGAGGCACTTATTCAACATGTCTTCCTCAAATGCTCAACAAGAAGATGGAAAATCAATCATATTTCCATCACCACCAATGCCAGTGTCTAAAGGTTCCCCCGGGTCATCTTCTAATAGAAGTAACCAGTTGTTGGAGCAATGGAAGTGA 1959 0.4232 MSAPGKIAEGHAAVRAVARLMEAATEAMAACEADLSQNLKALVYKKAILTPYSYGEKLSRPKSCIGSSISKDTNMEDHPIILESNREEEIGSIKDQNLGSTKGEMGEVREEDGRLKFLLASLVKDYQSLQTKFIDTLQQDKPITRQEATKVSGKSIALEECDELVTLSLGVSPKDHPTKDGKKINSNNRIQEKREDDIDDEDLDKGLALGLDIRFDPSPQAGATNDPNSPESSFVEEGKEEEPAEIWPPSKVLKTIKAGDKSGASNQQNQHKKARVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQVQRCVEDMSILITTYEGTHNHPLPISATAVASTTSAAASMLQSPSMSSQQGQTDSDIAAPIVNSLAAYNPNALNFSTCQMSSPHQFNFPNSSISTSNNSHPTITLDLTAPPTPSHSGNFTSGVSYTPKYSSTDLNFSSIFSHPLQSSIQPHSPWSTYSGYFNSGTLTQNRNQGFYIINSGSQPFQGHLHQPIYMSNHNNSQHHPLSDNIATATKAITANPKFQSALATALTTYVGNAGASGGSLRENHHVGESAPLMNLKLSSEDVSYTSSKNGIGCAPSRHLFNMSSSNAQQEDGKSIIFPSPPMPVSKGSPGSSSNRSNQLLEQWK* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1594 652 Gene3D WRKY domain 272 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1594 652 MobiDBLite consensus disorder prediction 634 652 - -
Dod02g1594 652 MobiDBLite consensus disorder prediction 214 250 - -
Dod02g1594 652 SMART WRKY_cls 287 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1594 652 SUPERFAMILY WRKY DNA-binding domain 280 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod02g1594 652 PANTHER WRKY TRANSCRIPTION FACTOR 72B 84 601 - -
Dod02g1594 652 MobiDBLite consensus disorder prediction 613 652 - -
Dod02g1594 652 MobiDBLite consensus disorder prediction 169 201 - -
Dod02g1594 652 MobiDBLite consensus disorder prediction 175 196 - -
Dod02g1594 652 Pfam WRKY DNA -binding domain 288 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1594 652 ProSiteProfiles WRKY domain profile. 282 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod02g1594 652 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 84 601 IPR044810 GO:0003700
Dod02g1594 652 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1594 Dod-Chr2 19598398 19604380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1594 105 434 WRKY Transcription Factor Family AT5G15130 43.182 1.02e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod02g1594 WRKY 8.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1594 - - lang:109339108 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1594 02 19598398 19604380 Dod05g1716 05 42525695 42531177 PCT
Dod05g2488 05 51167848 51171072 Dod02g1594 02 19598398 19604380 PCT