Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1585 ATGGGTTTGGGTGGTGAGGATGGTAAGATGGTGGAGTCTTGGGATGTGTGTAAATCAGAGGGGAGGAAGAATAAGAAGAAGAAGCAGGAAGAGGGTGGTGAGATAGTAGTGGAGGAAGAGGAGGAGGAGGTAGAGACTGGGTGTTGGGTTAGGCTTAGGTTCATTGGCAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTCAGTGGCACCAGCACTCATTATGCTGAAAGTAAATCAACTAACGATACGAGTAGAGACCAACCAACAGCTCCAGTAGTCTCGTCTACAACTACAAGCAATGCAGAAAGCAATTCATCCACTTCTAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAGTTCTCTTTCAATGATCTTAAGTTGGCAACAAGAAACTTTCGGCCTGAAAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATAGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACTGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGCCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTTAAGCTTATAGGATACTGCATCGAAGATGATCAAAGGTTGCTAGTATATGAATTTATGCCCCGGGGAAGCCTGGAAAATCACTTATTTAGGAGATCCCTGCCTCTTCCTTGGTCCATTAGGATGAAAATTGCACTAGGAGCAGCTAGGGGCCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTTATATATAGGGATTTTAAAACTTCCAATATATTATTAGATGCTGACTACAATGCCAAGCTCTCAGACTTTGGACTTGCCAAAGATGGCCCAGAAGGTGATAAAACCCATGTGTCTACTCGTGTGATGGGAACATATGGTTATGCAGCACCAGAATATGTCATGACAGGGCATCTTACATCAAGAAGTGACGTGTACAGTTTTGGAGTAGTACTACTTGAGATGTTGACCGGCAGAAGATCTATGGACAAACACCGACCCAATGGTGAACATAACCTCGTGGAATGGGCTCGACCTCATCTGGGGGAGAGGAGAAAGTTCTACAAGTTGATAGACCCTCGCCTGGAAGGCCACTTCTCCATAAAAGGAGCTCAGAAAGCCGCCCAACTGGCCGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGACCGCTAATGAGCGAAGTTGTAGAAGCTCTAAAGCCTCTGCCAAACCTCAAGGACATGGCAAGCTCTTCGTATTATTTCCAGACGATGCAGGCCGACCGCTTTAGCCCTAGCCCGAATACTCAAAATGGGCGGACGCAAGGAGCATTGCTCGCTCGGAATGGGCAGAGGAGCCTTTCAATACCTCATGGTACTCATGCCTCTCCATATCACCATCAGTTCCTCCAACCATCACCAAGACCCAATGGCAAAGCATAG 1476 0.4641 MGLGGEDGKMVESWDVCKSEGRKNKKKKQEEGGEIVVEEEEEEVETGCWVRLRFIGSCISSRSKVDSSVSGTSTHYAESKSTNDTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAARGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRKFYKLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSPSPNTQNGRTQGALLARNGQRSLSIPHGTHASPYHHQFLQPSPRPNGKA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1585 491 MobiDBLite consensus disorder prediction 11 34 - -
Dod02g1585 491 MobiDBLite consensus disorder prediction 63 113 - -
Dod02g1585 491 PANTHER OS01G0588500 PROTEIN-RELATED 67 481 - -
Dod02g1585 491 CDD STKc_IRAK 143 420 - -
Dod02g1585 491 Gene3D Phosphorylase Kinase; domain 1 96 222 - -
Dod02g1585 491 MobiDBLite consensus disorder prediction 465 491 - -
Dod02g1585 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Dod02g1585 491 MobiDBLite consensus disorder prediction 1 40 - -
Dod02g1585 491 Pfam Protein tyrosine and serine/threonine kinase 141 417 IPR001245 GO:0004672|GO:0006468
Dod02g1585 491 MobiDBLite consensus disorder prediction 63 109 - -
Dod02g1585 491 ProSitePatterns Protein kinases ATP-binding region signature. 143 175 IPR017441 GO:0005524
Dod02g1585 491 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 67 481 - -
Dod02g1585 491 Gene3D Transferase(Phosphotransferase) domain 1 223 438 - -
Dod02g1585 491 ProSiteProfiles Protein kinase domain profile. 137 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1585 491 SUPERFAMILY Protein kinase-like (PK-like) 123 442 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1585 Dod-Chr2 19494098 19497799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1585 84 417 Glycoside Hydrolase AT3G07070 53.550 4.03e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g1585 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1585 - - gmx:100787151 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1585 02 19494098 19497799 Dod02g1585 02 19494098 19497799 ECH