Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1578 ATGAGTCGCAAGAGGGACAAGTCCTACTCTTCCCGCCACGCGCCCTACGCCAAGCGCCGGCGCCCTCCTCCGGATCACACGGAGGAAGATGAGGAGCGTCCAGCCCCGAAGCCGGCGCCGCCGTCTGCGGTGGTGGTGATGGGCCTCCCTCAGGAATGCTCCGTCCTGGACCTCAAGTCCCGCTTCGAGATCTACGGCCCCATCGCCCGCATTCGCATCGACCGCGACGCCGTCGGCTACCTCACCTACCGGACCAAGGACTCCGCTGATGCCGCCATCGCCGCCGCTGCCGACCCTTCTTTCGGAATCACCCTTCACTCCAAAAAGGTTCAGGTGTTGTGGGCAACTGACCCTCTAGCCATGTGGAGGGAAGGAGTTGGTAATAATAGCAAGGACAAAGGGTCAATGTCAAAGCTTGTGCGTGCTGAGGTACCCTTGAGCAGGCATGGAAGAGGTAATAGGCTGGCTTCAGCTATAGGGAATACCAAAACTAGTGAAGACAGCTCAGGTAGCTCAGTTCTTGAAGTGCCTTTCAAAGGCAGAGAAATTGTTGCTTATGATGATATCCTCTAG 573 0.5759 MSRKRDKSYSSRHAPYAKRRRPPPDHTEEDEERPAPKPAPPSAVVVMGLPQECSVLDLKSRFEIYGPIARIRIDRDAVGYLTYRTKDSADAAIAAAADPSFGITLHSKKVQVLWATDPLAMWREGVGNNSKDKGSMSKLVRAEVPLSRHGRGNRLASAIGNTKTSEDSSGSSVLEVPFKGREIVAYDDIL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1578 190 MobiDBLite consensus disorder prediction 7 36 - -
Dod02g1578 190 Gene3D - 1 119 IPR012677 -
Dod02g1578 190 CDD RRM_SF 44 86 - -
Dod02g1578 190 MobiDBLite consensus disorder prediction 1 42 - -
Dod02g1578 190 SUPERFAMILY RNA-binding domain, RBD 19 123 IPR035979 GO:0003676
Dod02g1578 190 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 95 IPR000504 GO:0003723
Dod02g1578 190 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 42 117 IPR000504 GO:0003723
Dod02g1578 190 SMART rrm1_1 43 113 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1578 1 190 Homeobox Transcription Factor Family AT1G27050 53.171 5.01e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1578 - - gmx:106797175 279.256