Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1562 ATGTCTACCCCAGCACCCAACTCCTCTACCTTAGCCACACCCCGGACCAAAACCACCCTCCCCTTCACATTCTCCTTCTTGCTTCTAGTCCCACCACTCTTCTTCTTCTTCTTCACATCCACCTATGCACACACATGCTCATCTAACTCAAACAACTCCACAACATACCCTTGTCCACCATTCCCTTCCAATCCACCTTTCCCATTCTCCTCTTCCCCAGGTTGTGGCCACCCTTCCTTCCAATTAAAGTGCTCCACTCCCCACTCCCTCATCTCTATCAACAACATCTCCTTCTCCATCCTCAGCTACAAGCCCAACACTTCCTCCATTCGCCTCTCTCCTCACAACCCCATCACCACCGCACAACAAAATCACAATACCTGCCCATCAAGCCACTTCCTTTCCATTCCAAACCAATCCATCAACCTTTCAGGCTCCCCATTCAAGGTCTCAGACGCCACCTGCTCCCGCTTCAACTTCCTCAAACCGTGTCCCCCTCCAACGCTTCCGAACTGCAGCCACTGCCCCTGGGAATGCAAACTCATCAAGAAACCAACCCACCTCCTCCTCAACGACTGCGGATCCACGCACTACTCTGCCTCGGACTCCGAACCCAGATGCCAAAACGACATCTTGGGATACCTCGACGACCTGCTTTCTTCCCATGGGATCGAAGTTGAATGGGACGAAGCACAAGACCCTTACTTCTCGAGCTGCAAACAATGCCGCAACAACGCCAGGGGATTCTGCGGATTCAACTCATCGGACTCTAACAAGAGCTTCATCTGTTTCCACTCTGAGTCAACAATCTCACCGCCATGGATTCACAAGGTGAAACTGAACGCTAACAAAACGACGGTGCTGACCGTCGCGGCGGCGTTGACCTCGCTGTTAGTCCTTGTTTCTATTGCTACTTTCGTTGTCCGAAGGAGAAGCGGCGTTCTGAAGAGACCGCCGTCGTCGGAGGAAGATCCGACGGCCGTGTTCCTCCGCAACAACCGGAGTGTCCTCCCTCCGGTGTTCACCTACGAGGATCTTGAGTCCTCAACCAACAGCTTCGACCAGAAGCGCAAGATAGGCGACGGCGGGTTCGGCTCCGTGTACCTCGGCCAGCTCCGCGACGGAAGGCTCGTGGCGGTGAAGCACCTCCACCACCACCATTCCGCCGCCGCCGGGAAAGCGTTCTCCACGAAATCCTTCTGCAACGAGATCCTCATCCTCTCTTCGATAAACCACCCGAACCTCGTGAAGCTCCACGGTTACTGCAGCGACCCGAAAGGTTTGCTCTTAGTGTACGACTATGTCCCCAACGGCACCCTCGCCGACCACCTTCATAACTGCAAGAACAGAAAAGCACCACTGAAGTGGCAGGTGAGACTGGAAATGGCGCTGCAAATTGCGATGGCGATGGAGTACCTTCACTATTCGGTGGCGCCGCCAGTGGTGCACAGGGACATAACTACTTCGAATATCTTCGTAGAGAAGGATATGAGGGTTAAGGTTGGGGATTTCGGGCTGTCGAGGCTTTTGGTGTTGCAGGACAAAACGGCGTCGTCGAGCTCAACCGGGAACGGGTGCGTGTGGACGGGGCCGCAGGGGACGCCAGGGTATTTAGACCCGGACTACCACCGGTCGTTCCGGTTAACCGAGAAGAGCGACGTGTACAGCTTCGGTGTGGTGCTTCTAGAACTGATTTCAGGGCTTAGGGCGGTGGACCAGAGGAGGGACAAGAGGGAGATGGCGCTGGCGGACATGGTCGTTTCGAGGATCCAGATGGGGCAGTTGAGCCAGGTGGTGGATCCCGTTTTGGCGGCGGAGGAAGGGACGGTGGATGACGCCGTCGCTGCCGTGGCGGAGCTTGCTTTCCGGTGCGTCGCAGCGGAGAAGGACGACCGCCCGGATTCCCAGGAGGTTGTGCAGGAGCTCAGGAGGGTGAGGAACCGTGCCGACGTGGCAAAGGAGTGA 1965 0.5603 MSTPAPNSSTLATPRTKTTLPFTFSFLLLVPPLFFFFFTSTYAHTCSSNSNNSTTYPCPPFPSNPPFPFSSSPGCGHPSFQLKCSTPHSLISINNISFSILSYKPNTSSIRLSPHNPITTAQQNHNTCPSSHFLSIPNQSINLSGSPFKVSDATCSRFNFLKPCPPPTLPNCSHCPWECKLIKKPTHLLLNDCGSTHYSASDSEPRCQNDILGYLDDLLSSHGIEVEWDEAQDPYFSSCKQCRNNARGFCGFNSSDSNKSFICFHSESTISPPWIHKVKLNANKTTVLTVAAALTSLLVLVSIATFVVRRRSGVLKRPPSSEEDPTAVFLRNNRSVLPPVFTYEDLESSTNSFDQKRKIGDGGFGSVYLGQLRDGRLVAVKHLHHHHSAAAGKAFSTKSFCNEILILSSINHPNLVKLHGYCSDPKGLLLVYDYVPNGTLADHLHNCKNRKAPLKWQVRLEMALQIAMAMEYLHYSVAPPVVHRDITTSNIFVEKDMRVKVGDFGLSRLLVLQDKTASSSSTGNGCVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQRRDKREMALADMVVSRIQMGQLSQVVDPVLAAEEGTVDDAVAAVAELAFRCVAAEKDDRPDSQEVVQELRRVRNRADVAKE* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1562 654 Gene3D Phosphorylase Kinase; domain 1 330 434 - -
Dod02g1562 654 CDD STKc_IRAK 359 642 - -
Dod02g1562 654 Pfam Protein tyrosine and serine/threonine kinase 355 642 IPR001245 GO:0004672|GO:0006468
Dod02g1562 654 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Dod02g1562 654 Coils Coil 652 654 - -
Dod02g1562 654 Gene3D Transferase(Phosphotransferase) domain 1 435 653 - -
Dod02g1562 654 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 47 650 - -
Dod02g1562 654 ProSitePatterns Tyrosine protein kinases specific active-site signature. 481 493 IPR008266 GO:0004672|GO:0006468
Dod02g1562 654 ProSiteProfiles Protein kinase domain profile. 353 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1562 654 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 47 650 IPR045274 GO:0007166
Dod02g1562 654 SUPERFAMILY Protein kinase-like (PK-like) 331 642 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1562 Dod-Chr2 19090383 19092453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1562 56 654 Receptor kinase-like Gene Family AT1G69910 61.175 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod02g1562 PK_Tyr_Ser-Thr 5.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1562 - - cam:101489033 772.696