Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1555 ATGGATCCCGCTGCCATCATCGACGAAGCTTCCTTCCCCACCGGAACCGCCCCCAATACAGCGCCGTTTCACTTGCCGGAGATCTGGCACTTTCGTCCTCCGCCTCTCGGAGACCCTTCCTCCGCCGCCGCCGGAGGCCTCGGCCTCAGGAGTCCGCAGTTCGGCCATGCCGCTATGGGAGGGCAGTTCGGGGATTTTGCCTCCGGTCAGACCCGGGACGTTCCGGTAGGTTCGGAGCACGGGTCGGGTCCGATCCACAACCGCAATAGCCACAGGAAGAGGCGCGATTCCGAGGAGGAGGAATCCGCTAAGGGCGTCTCCGCCAGTAACAATGGCGGTGCCAATGCCATCGCCAACTGCGTGAGTGATGGTGGTGATGGGAAACGGGTGAAGGGATCAGGGAACAGGAATGAGATTGGTAAAGGTGACGTAGAACTCAGTTCAGGAAAGCCTGCGGAGCAACAAAGTGCACAGCCACCACCGACTGAGCCTGCTAAGCAAGACTACATTCATGTACGAGCAAGAAGGGGTCAAGCCACTGATAGCCACAGTCTTGCTGAAAGAGCTAGAAGGGAGAAGATTAGTGAAAGGATGAAAACTCTTCAGGATTTAGTCCCTGGTTGTAATAAGGTCATTGGGAAAGCATTGGTCCTTGATGAGATAATAAATTACATCCAATCACTGCAGCGCCAAGTAGAGCTTTTGTCAATGAAGCTTGAAGCAGTAAATGCAAGATTGACCCCTGGCATTGAAGTGTTTCCTCCTAAAGATTTAGATCAGCAAACATTTGATACACACGGCATGCCGTTTGCTTCACAAGCTATTAGAGAGTATAGCCGGGGACCATCACCAGAGTGGTTACATATGCAGGTAGGAGGTGGTCTTGAAAGAACAACATAG 900 0.53 MDPAAIIDEASFPTGTAPNTAPFHLPEIWHFRPPPLGDPSSAAAGGLGLRSPQFGHAAMGGQFGDFASGQTRDVPVGSEHGSGPIHNRNSHRKRRDSEEEESAKGVSASNNGGANAIANCVSDGGDGKRVKGSGNRNEIGKGDVELSSGKPAEQQSAQPPPTEPAKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQVELLSMKLEAVNARLTPGIEVFPPKDLDQQTFDTHGMPFASQAIREYSRGPSPEWLHMQVGGGLERTT* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1555 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 246 IPR036638 GO:0046983
Dod02g1555 299 Pfam Helix-loop-helix DNA-binding domain 182 229 IPR011598 GO:0046983
Dod02g1555 299 MobiDBLite consensus disorder prediction 32 165 - -
Dod02g1555 299 SMART finulus 184 234 IPR011598 GO:0046983
Dod02g1555 299 Gene3D - 175 248 IPR036638 GO:0046983
Dod02g1555 299 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 299 IPR024097 GO:0006355
Dod02g1555 299 CDD bHLH_AtBPE_like 168 253 - -
Dod02g1555 299 Coils Coil 225 245 - -
Dod02g1555 299 PANTHER BNAC05G07950D PROTEIN 1 299 - -
Dod02g1555 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1555 Dod-Chr2 18905403 18908665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1555 13 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 50.000 2.26e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g1555 HLH 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1555 - - lang:109332242 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1555 02 18905403 18908665 Dod02g1555 02 18905403 18908665 PCT