Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1553 ATGGCCATAAACAATAATATGATAGACGTTTTGCAAGATCAAAAGTGGGTGTCTATCCCCTGGAAGAAGTTGCAAGTTGGTGACATTGTCAAGGTTAAGCAGGATGGATTCTTTCCTGCGGATCTGCTTTTTCTGGCTAGTACAAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGACGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACATGGGATTACTTGACTCCGGAGAAGGCATCTGAATTTAAAGGTGAAATTCAGTGTGAACAGCCGAACAATTCATTGTATACCTTCACAGGAAATCTTATAATTCAAAACCAAACACTGCCTGTCAGTCCAAGCCAACTTTTGTTGCGAGGATGCAGTCTCCGGAATACAGAGTATATTGTTGGGGTTGTCATTTTTACAGGACATGAAACAAAGGTAATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAAAGGAAGCTTGACAAGCTCATACTCACTCTATTTGCAACCCTCTTCGTGATGTGTTTTATTGGAGCAGTTGGCAGTGCTATATTTGTAAATAAGAAGTATTTCTACTTACATCTTGAATCATCAGAGAAGGGCTCAGCACAGTTTGACCCTAGAAACAGATTTTTGGTTTTCCTTCTGACTATGTTTACCCTCATCACATTATACTCAACTATCATCCCAATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAGTCCACTCAATTTATCAACAAGGACTTGAACATGTACCATTATGAAACCAATACCCCTGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATATTCTCTGACAAAACTGGGACTCTGACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTACGGAAAAGGTGTGACTGAAATTGAGAGGGGAATAGCGGAGCGTAGTGGCATAAAACTTGAGGAAAATATCTCGGCCAATGCAGTGCGAGAGAGGGGTTTTAATTTTGATGATGTTAGGCTTATGAGAGGAGCTTGGAGGAACGAGCCTAATCCTGATAGCTGCAGGGAATTCTTCAGGTGCCTTGCTATCTGCCATACTGTGCTTCCTGAGGGTGACGAGTCCCCCGAGAGGATCAGATATCAAGCTGCTTCACCTGATGAGGCTGCTCTTGTTATTGCTGCGAAGAATTTTGGTTTCTTCTTTTACAGGCGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAAGATGTTTCATATGAGATTTTGAATGTGCTTGAGTTTAACAGTACGAGGAAGCGCCAGTCTGTTGTATGTCGTTATCCAGATGGAAGGCTTGTATTGTACTGTAAGGGTGCTGATACTGTAATCTATGAGAGATTAGCTGATGGTAATAATGATATAAAAAAGGTTACTCGGGAGCATTTAGAACAGTTTGGATCAGCTGGACTACGAACATTATGCCTGGCCTACAAAGAATTACTTCCTGATGTTTATGAAAGCTGGAATGAGAAGTTCATCCAGGCCAAATCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCCTGCATTGAGACTCTTCAAAGAGCTGGCATTAAAATATGGGTGCTTACAGGGGATAAGATTGAAACAGCAATTAATATTGCGTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTGTTATCAGCTCTGAAACTAATGCAATTAGAGAAGTCGAAGACAGGGGGGACCAAATTGAAACTGCACGATTTATTAGAGAAGAAGTTAAAAAAGAGCTGAAGAAGTGCCTTGAGGAAGCACAAAGCTACTTTAGCTCTCTATTTGGTCCTAAATTAGCACTTATAATTGATGGAAAGTGTTTAATGTATGCGTTGGATCCAAGTTTGAGAGTCATGTTGCTGAATTTGAGTTTGAACTGTCATGCTGTTGTTTGCTGCCGAGTATCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTCAAGAAAGGTGCACGGAAAATAACACTTAGTATTGGTGATGGAGCCAACGATGTTAGCATGATTCAGGCTGCCCATGTTGGTGTAGGCATTAGTGGGCTGGAGGGTATGCAAGCAGTGATGGCCAGTGATTTTGCTATTGCACAGTTTCGTTATCTTACCGATTTGCTTCTTGTTCATGGACGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTATAAGAATCTGACATTCACTCTTACCCAGTTTTGGTTTACCTTTCAAGCTGGGTTTTCTGGCCAGCGATTCTATGATGATTGGTTTCAGTCATTGTATAATGTTATCTTCACAGCACTGCCTGTGATCATTGTTGGACTATTTGACAAGGATGTCAGCGCTTCTCTATCTAAGAAGTATCCTGAACTGTACAGAGAGGGGATAAGGAATGTGTTTTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTGTCTACCAGTCTCTAATATTCTTTTATTTCGTGAGTACGTCAACTGTAAGTGGTAAAAATTCAGCAGGCAAGATATTTGGACTCTGGGATGTCAGTACAATGGCTTTCACTTGTGTTGTAGTTACTGTCAACTTGCGACTTCTCATGATTTGTAATTCAATCACAAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTATTTTTTTATATTCAGGGATCAGGACTACCTATGATCGTCAGGAGAATATGTACTTTGTCATATATGTCTTGATGAGTACATTATATTTCTACCTAACACTACTCCTTGTCCCTGTTGCTGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAGAGATGGTTCTTCCCATATGATTATCAGATTGTTCAAGAAATGCATGGACATGAAAGTGATGAGACCAGCAGGGCACAACTGCTAGAGATAGGGGACCAGCTTACGCCAGCCGAGGCGAGGAGCCATGCCATATCTCAACTCCCACGTGAGATATCAAAGCATACCGGGTTTGCTTTTGACTCACCTGGTTACGAGTCATTCTTTGCTGCACAGCTTGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCAAGACGTGCAAGCATGAAATCTCGGCCAAAGATTGGACAGAATAAGTAA 3276 0.4066 MAINNNMIDVLQDQKWVSIPWKKLQVGDIVKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQNQTLPVSPSQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSAIFVNKKYFYLHLESSEKGSAQFDPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLNMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGKGVTEIERGIAERSGIKLEENISANAVRERGFNFDDVRLMRGAWRNEPNPDSCREFFRCLAICHTVLPEGDESPERIRYQAASPDEAALVIAAKNFGFFFYRRTPTMIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGNNDIKKVTREHLEQFGSAGLRTLCLAYKELLPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETNAIREVEDRGDQIETARFIREEVKKELKKCLEEAQSYFSSLFGPKLALIIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQAGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNVFFKWRVVAIWAFFSVYQSLIFFYFVSTSTVSGKNSAGKIFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFIFIFLYSGIRTTYDRQENMYFVIYVLMSTLYFYLTLLLVPVAALFCDFVYQGVQRWFFPYDYQIVQEMHGHESDETSRAQLLEIGDQLTPAEARSHAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMKSRPKIGQNK* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1553 1091 Pfam Cation transport ATPase (P-type) 387 479 - -
Dod02g1553 1091 SFLD C1.7: P-type atpase like 270 770 - -
Dod02g1553 1091 Pfam Phospholipid-translocating P-type ATPase C-terminal 747 997 IPR032630 -
Dod02g1553 1091 Gene3D - 553 759 IPR023214 -
Dod02g1553 1091 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1087 - -
Dod02g1553 1091 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 997 IPR023298 -
Dod02g1553 1091 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 2 1005 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod02g1553 1091 Gene3D - 417 552 IPR023299 GO:0000166
Dod02g1553 1091 CDD P-type_ATPase_APLT_Dnf-like 3 879 - -
Dod02g1553 1091 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1087 - -
Dod02g1553 1091 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 295 558 IPR023299 GO:0000166
Dod02g1553 1091 Gene3D - 1 153 - -
Dod02g1553 1091 Pfam E1-E2 ATPase 5 244 - -
Dod02g1553 1091 SFLD p-type atpase 270 770 IPR044492 -
Dod02g1553 1091 SUPERFAMILY Calcium ATPase, transduction domain A 5 149 IPR008250 -
Dod02g1553 1091 PRINTS P-type cation-transporting ATPase superfamily signature 288 302 - -
Dod02g1553 1091 PRINTS P-type cation-transporting ATPase superfamily signature 719 738 - -
Dod02g1553 1091 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 692 798 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g1553 1091 SUPERFAMILY HAD-like 276 761 IPR036412 -
Dod02g1553 1091 ProSitePatterns E1-E2 ATPases phosphorylation site. 290 296 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1553 Dod-Chr2 18866459 18880745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1553 1 1087 Primary Pumps ATPases AT1G59820 80.239 0.0 1877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1553 K14802 - gmx:100815547 2032.68