Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1552 ATGTCGTCGGAAAGTGACATCGCACCTTCGTCTCCGGCGTCTTTCCGGCTCCGGTGGGACGTGTTCCTGAGCTTCAGGGGCACCGACACCCGCGAGACCTTCACAAAGGACCTCTACGAGGCGCTTGAGGCCGCCGGAGTCCGGGTCTTCCGGGATGACGACGGGCTGCCCCGCGGCGGCGAGATAGCGCCGAGTCTTCTGGAAGCCATAGAAGACTCGGCGGCGGCCATCGTGGTGCTGTCCCCAGACTACGCGTCCTCACACTGGTGCCTGGAGGAGCTGGCCAAGATATGCGAGTGTGGGAGGCTGGTGCTGCCCGTTTTCTACTGGGTCGACCCCTCTGATGTCCGAAAGCAGATGGGCCCGTTTAAGGCGGGTTTTGGGTCTCACAAAGAGAGGTTTGGAGAAGAGAAGGTTGTGAGGTGGAGGAGTGCTATGAAGAAAGTTGGTGGAATTGCTGGCTGGGTTTTTGATGACAACAGTGATAAGCTCATTCGGATTTTGGTGCAAACGATTTTGAAGCAAATGAGGAACACTCCACTGAGTGTGGCTGAGTATGCTGTTGGGCTTGATGAAAGAGTTGAAGAGTTAAGCAAGCTATTTGATGTAAAATCCAATGATGTAAGAGTTTTGGGTTTGTATGGGATGGGAGGGGTTGGTAAGACAACCCTTGCCAAAAGCCTCTTCAACAACATTGTTGCTCATTTTGTGAAACGCGCCTTCATTTTAAATGTTACAGAAGTTGCAAAAACCAATGATGGCTTGGTTTCTCTTCAGAACAAAATCCTTGGTGATCTTTCAGATGGAAAAGTGAATCCCATCACTGATGCTAATGTTGGTATTTCTGCCATCAGAAGAATAGTAGAGGAAAACAGAGTTCTGCTTGTCCTTGATGATGTTGATGATGTAAAACACCTAGAGTTTTTGATTGGTAACAGAGAATGGTTTTATAAAGGAAGCCGTGTTGTGATCACCACAAGGGATAAACAAGTTTTACATGAGAGTTATGTAAATGTGCACTATGCAGTGGAGGAATTGAAATCATCTCAGGCAAAAGAACTATTCTGCTACCATGCAATGAGAAGAAAGGAACCTTCTGAAGGTTTTTCGAGCCTTTCAGAACAGATTGTGTCTCTTACAGGAGGGTTGCCTTTGGCTTTGGAAGTCTTTGGTTCTTTTCTGTTTGACAAGAGGACGATTAAGGAATGGAGAGATGCTCTTGAGAAGCTGAAACAGATTCGCCCGGAAAGCCTTCAAGATGTGCTGAAGATCAGTTTTGAAGCCCTGGATGGACAGGAGAAGTGTGTGTTCCTTGACATTGCTTGCTTGTTTGTGCAAATGGAAATGAAGAGAGATGATGTGGTTGACATATTGAATGGTTGTAACTTTAGAGGGGAGATAGTATTAACAGTCCTAACTGCAAAGTGTCTTATTAAGATCACTAGGGGTAGTGTCCTGTGGATGCATGATCAGGTTAGAGATATGGGAAGGCAAATTGTTCAAAATGAAAGCCTTGTAGATTCTGGTCTGCGTAGCAGGCTCTGGGATCGTGATGAAATATTGACTGTATTGAAGAGTAAGAAGGGAACAAGAAAAGTTGAAGGCATCGTCCTAGACTGTGTAAAGAGAAGGAAGAGTGAGCCTTCAGATCGTACTGCTGAAGAAATTACTTGGGATAACTTTCGACAGAAGCCAAGTTTTGAATCAGCATCCGCATATGTGAAGGCCAAGTATAAGAAGTATCTGCAGGATAGAGAAGAGAACGCAAAGCAATTTGTCCTTCGTACAGATTTCTTTCAACCAATGGTTTCCTTAAGGCTGCTTCAAATTAATTATTCGAGGTTGGAAGGACAGTTCAGGTGTCTCCCTCCAGGACTAAAATGGTTGCAATGGAAACAATGTCCATTAAGTAACATGCCGTCTTCCTACTGTCCTATGGAGCTTGCTGTGCTTGATCTCTCGGAAAGCAAGATTGAAACGTTGTGGGGCAGGCACATTAACAAGGTTGCTGAGCACTTGATGGTTTTAAACCTCTCCAGTTGCGACCGTTTAGTAGCAATTCCTGATTTAACTGGGTACGTATCTCTTAAAAAGATTATTTTGCAAGAATGCACTCTTTTAACTAGGATTCATGAATCACTTGGAAACCTGAGTTCCTTGGTCCACTTGAACTTGCACTACTGCTATAGCCTTGTAGAGTTACCTGGTGATGTCGCTGGGCTGAAAAATCTTGAGGACCTTATTCTTTCTAACTGCTGGAAATTGAAAGCATTACCTAAGGACCTAAGCTGCTTGGTCTCTCTAAGACAACTTCTCATTGATGACACTGCTATAACTGAGCTACCTGAGTCCATCTTCCACCTTACAAAACTTGAAAAGTTGAGTGCAAATGGATGCCGTCATTTGAAGAGGATACCTTACTGCATTGGGAAACTCTGCTCTCTGCAAGAACTGTCACTTAACCATACAGCACTAGAAGAATTGCCTGATTCTGTTGGTTCTTTGGAGAACCTTGAGGCGCTTGGTTTGGTGGGGTGTAAGTCCCTCTCATTGATTCCTGACTCTATTGGGAGACTAATTTCATTGACACAATTATTTTTGGATGTCAGTGGAATCAGAGAATTGCCTCCTTCCATTGGTTCTTTATCATATTTAAGGCATCTGTCTGTTAATGGCTGCACTTCTCTTGGTGAAATCCCTGAGTCAATAAAAGCATTAGTCTCTATGGTTGTGTTTAAGCTAGATGGGACACCAATTACCAAGTTGCCAGATCATATTGGAGCCATGAAAATGTTAGAAAAGATTGAGATGACAAATTGTCAGCATCTCAGGTTCCTACCAGCATCAATTGGAAACTTGTCAGCACTTACTACCTTGGACATGTACAAGACTAACATCTCTGAATTGCCAGAATCAATAGGAATGTTGGAAAACCTTATTCACTTAAGATTGGACATGTGCAAACAGCTCCAGAGGCTTCCAGCCTCCATGGGAAATCTGAAGTCTTTGCAGCGGCTACAGATGAAGGAAACAGCAGTTACTCAACTACCTGATAGCTTTGGGATGCTTTCAAGCTTGGTAAAGTTAGATATGGAAAGAAGGCCTTACCTTACTATGGCTGGAAACAACATGGCTAACGTACAAGAAGAACCTAATTCAGCTACAATCTTAACTGGTTTTTGTAATCTAACATCTTTGGAAGAGTTAAATGCTCATGGTTGGAGAATATCTGGGAAAATCCCAGATGATTTTGAAAAGCTATCATCACTGGAAACTTTAAATTTAGGCCACAATGATATTTTCAGTCTTCCAGCCAGCATGAGAGGCATGTCCTGTCTCAAAAAGATTCTGCTGTCAAATTGTAGGGAGCTCATGTTGCTGCCTCCTCTTCCCTCTAGCTTAGTAGATGTTGATATTGCAAACTGTACTTCATTACAGCACATATCTGATATTTCAAACTTGGACAACATAGAGGAGTTGAACCTTACAAATTGTGAAAAGGTGGTAGATATACCAGGTATTGAACATTTGAAGTCCTTGATGAGATTGTACATGAGTGGTTGCATTGGATGTCACCATGCAGTGAAGAAAAGATTTTCAAAGGATCTACTTAAAAATTTACAGATCGTTATTATGCCTGGAAGCGAAGTTCCAGATTGGTTCTCAGGTGAATCAGTTGTGTTTTCCAAGAGAAGAAACCGTGAGCTTAAAGGTATTATTTGTGTTGGTGTGCTCTCTTTCAACCATATACCAGAAAACCGAAGAGATGAGCTCCAGTTGGTGGATGTTCAAGGAAAAGTCTTCAATTTGACCGCTAATGTATACAGCACAACGCTTCGTCTTCTGGGAGTGCCTCGGACAAATGAAGACCACATTTTCTTGCGCCGATTTGGAGCTCACACCTCGTTAGTCCATGAGTTGAAAGACAAATATATCTTGCATTTGACAAAGCGGGAACCACCCTTTGTTGAGGAGCTGGAGCTGAAGAACTGTGGGATTCATTTAGTCTTCGAAGGTGATGATGATTATGAGGGAGATGAAGGATCAATAGACGAACGCTACCATTCCGTGTCACAAAAATTAGCCAAATTCTTCAACTCTATTGCGGAGTGTAATGGTATCAGACCTATGATGAAGAAAAGGAAAAGAGAGTGTGCAGACCACTATGGAGAGAGAGTATGCAAGAGCTTGCGAGAAAAGGAATGA 4206 0.4315 MSSESDIAPSSPASFRLRWDVFLSFRGTDTRETFTKDLYEALEAAGVRVFRDDDGLPRGGEIAPSLLEAIEDSAAAIVVLSPDYASSHWCLEELAKICECGRLVLPVFYWVDPSDVRKQMGPFKAGFGSHKERFGEEKVVRWRSAMKKVGGIAGWVFDDNSDKLIRILVQTILKQMRNTPLSVAEYAVGLDERVEELSKLFDVKSNDVRVLGLYGMGGVGKTTLAKSLFNNIVAHFVKRAFILNVTEVAKTNDGLVSLQNKILGDLSDGKVNPITDANVGISAIRRIVEENRVLLVLDDVDDVKHLEFLIGNREWFYKGSRVVITTRDKQVLHESYVNVHYAVEELKSSQAKELFCYHAMRRKEPSEGFSSLSEQIVSLTGGLPLALEVFGSFLFDKRTIKEWRDALEKLKQIRPESLQDVLKISFEALDGQEKCVFLDIACLFVQMEMKRDDVVDILNGCNFRGEIVLTVLTAKCLIKITRGSVLWMHDQVRDMGRQIVQNESLVDSGLRSRLWDRDEILTVLKSKKGTRKVEGIVLDCVKRRKSEPSDRTAEEITWDNFRQKPSFESASAYVKAKYKKYLQDREENAKQFVLRTDFFQPMVSLRLLQINYSRLEGQFRCLPPGLKWLQWKQCPLSNMPSSYCPMELAVLDLSESKIETLWGRHINKVAEHLMVLNLSSCDRLVAIPDLTGYVSLKKIILQECTLLTRIHESLGNLSSLVHLNLHYCYSLVELPGDVAGLKNLEDLILSNCWKLKALPKDLSCLVSLRQLLIDDTAITELPESIFHLTKLEKLSANGCRHLKRIPYCIGKLCSLQELSLNHTALEELPDSVGSLENLEALGLVGCKSLSLIPDSIGRLISLTQLFLDVSGIRELPPSIGSLSYLRHLSVNGCTSLGEIPESIKALVSMVVFKLDGTPITKLPDHIGAMKMLEKIEMTNCQHLRFLPASIGNLSALTTLDMYKTNISELPESIGMLENLIHLRLDMCKQLQRLPASMGNLKSLQRLQMKETAVTQLPDSFGMLSSLVKLDMERRPYLTMAGNNMANVQEEPNSATILTGFCNLTSLEELNAHGWRISGKIPDDFEKLSSLETLNLGHNDIFSLPASMRGMSCLKKILLSNCRELMLLPPLPSSLVDVDIANCTSLQHISDISNLDNIEELNLTNCEKVVDIPGIEHLKSLMRLYMSGCIGCHHAVKKRFSKDLLKNLQIVIMPGSEVPDWFSGESVVFSKRRNRELKGIICVGVLSFNHIPENRRDELQLVDVQGKVFNLTANVYSTTLRLLGVPRTNEDHIFLRRFGAHTSLVHELKDKYILHLTKREPPFVEELELKNCGIHLVFEGDDDYEGDEGSIDERYHSVSQKLAKFFNSIAECNGIRPMMKKRKRECADHYGERVCKSLREKE* 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1552 1401 Gene3D - 14 175 IPR035897 -
Dod02g1552 1401 ProSiteProfiles TIR domain profile. 17 176 IPR000157 GO:0007165
Dod02g1552 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Dod02g1552 1401 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 155 IPR035897 -
Dod02g1552 1401 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1326 IPR044974 GO:0006952
Dod02g1552 1401 Gene3D - 345 430 IPR042197 -
Dod02g1552 1401 ProSiteProfiles Leucine-rich repeat profile. 1089 1110 IPR001611 GO:0005515
Dod02g1552 1401 SMART till_3 18 152 IPR000157 GO:0007165
Dod02g1552 1401 SUPERFAMILY L domain-like 487 940 - -
Dod02g1552 1401 Gene3D Ribonuclease Inhibitor 1134 1208 IPR032675 -
Dod02g1552 1401 Gene3D Ribonuclease Inhibitor 910 1133 IPR032675 -
Dod02g1552 1401 Pfam TIR domain 19 179 IPR000157 GO:0007165
Dod02g1552 1401 Pfam NB-ARC domain 197 424 IPR002182 GO:0043531
Dod02g1552 1401 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 1326 - -
Dod02g1552 1401 Gene3D - 176 340 IPR027417 -
Dod02g1552 1401 SMART LRR_typ_2 1000 1022 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 1087 1109 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 765 788 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 812 835 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 859 882 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 906 929 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 953 976 IPR003591 -
Dod02g1552 1401 SMART LRR_typ_2 741 764 IPR003591 -
Dod02g1552 1401 Coils Coil 1395 1401 - -
Dod02g1552 1401 Gene3D Ribonuclease Inhibitor 579 909 IPR032675 -
Dod02g1552 1401 PRINTS Disease resistance protein signature 287 301 - -
Dod02g1552 1401 PRINTS Disease resistance protein signature 210 225 - -
Dod02g1552 1401 PRINTS Disease resistance protein signature 380 394 - -
Dod02g1552 1401 PRINTS Disease resistance protein signature 833 849 - -
Dod02g1552 1401 SUPERFAMILY L domain-like 896 1210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1552 Dod-Chr2 18852565 18860513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1552 19 888 WRKY Transcription Factor Family AT4G12020 27.559 1.86e-77 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1552 - - gmx:100784137 2039.23