Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1548 ATGTCCACCGAGATTTCATCGACCCCGGGAGCTTTCAGGCTCCGCTGGGACGTGTTCCTGAGTTTCAGGGGACCAGACACACGCCACTCCTTCATCGAACCGCTCTACAACGCCCTCCACTCGCGCGGAGTTCGGGTCTTTCGAGATGACGAAGGTTTGGAAGGTGGCGACGACATTGCTCACTCTCTTCTGGAAGCCATTGATGACTCTGCAGCTGCCATCGTTGTCCTCTCGCCTAACTACGCTTCTTCCCGCTGGTGCCTTGAGGAGCTGGTCAAGATCTGCGACTGTGGCAGGCTCATTCTCCCTGTCTTCTATAAGGTCAACCCTCACCAAGTCGGAAGCCAAAAGGGTCCTTTTGATGAGGCTTTCAAGATCAACGAGGAGAAGTTTGAGAGAAACATGGTTCTTAGGTGGAGAGAGGCTATGAGGAAAGTGGGTAAACGCTCTGGTTTTCCTCTTCCTGATAAAAGCAGTGCTGAAGACCAAGCTAATCTGATTAGACGCTTAGCGGAAAAGGTTGCAAGAGAACTTCGTAACACTCCACTAGGTGTGGGTCAGTTTACAGTAGGGCTTGATCACCGTGTTGAGGAGTTGGCCAATCTGTTGGAGGTCAAATCCAATGGCTTCCGAGTGTTGGGGTTGTATGGGATGGGCGGGGTCGGTAAAACAACCCTTGCAAAGACTCTCTTCAACAACCTCGTTGCTCATTTTGAGCACCGCACATTCATTCCAAATGTCAGAGAAGCTTCATCAAAAGACGATGGCTTGGTTTCTCTTCAAAAGAAAATCATTGGTGAACTTACCGATCGATCCAGAGCGGTTCACATCAGTCATATCCCTGCAGGTGTTGCTTCAATCAGAAGGACAGTTCAAGAAAACCGAGTTCTGATAGTCTTGGATGATGTCGACAATGTGAATCAGCTTGATTCTCTAATTGGAAAAAAAGAATGGTTCTATGAAGGAAGCCGCGTAATCATCACCACAAGGGATATACAAGTTTTAATTGACCATAATGCTGATTTGCGTTATCCAGTTAGGGAGTTGGGTTCAGATGATGCCTTGGAACTATTCAGTTACCATGCTTTGAGAAGAAAGAAGCCTACAGATGAATTTCTTAGCTTATCAAAGCGAATTGTGAAGCTCACAGGAGGACTACCTTTGGCTCTGGAAGTGTTTGGTTCATTCTTGTTTGATAAGAGGAGGGTGGAGGAATGGGTTGATGCTCTTGACAAGCTTGGACGCATTCGGCCCCAACACCTGCAAGATGTGCTCAGGATAAGTTACGATGGGTTGGACCAAGAAGAGAGGACCATATTCTTAGACATTGCTTGTTTGTTGGTCCAAATGGAAATGAAGAGAGATGATGTAATAGATGTGATGAGGGGTTGTGGTTTCAGTGCAGAGGTGACTATCACAGTGCTCACAGCAAGAAGCCTCATCAAAATTGCTGAGGACGATAACACGGTGGTGATGCATGATCAAATTAGAGACATGGGAAGACAAATTGTAAGAGATGAAAGCCCTGGTGATCCCGGAATGCGTAGCAGATTGTGGAATCGTGCTGAAATCTTGACCGTTTTGCAGGGGAACAAGGGAACGAGATCTACCCAAGGAATCACCCTCGACTTCAAGGTAAAAATAAATTCTGGGCACAATCTTCGTCAGCAGATGTCCATCCTAGAACTATTACCATTTTTAAAACCAAGCCTCACGGAGGAAGAGAAAGAGGTTACACTTCAGACAAAATCATTTGAATCAATGATGAACTTGAGACTACTTCAGATCAATAATATGAGACTACAAGGGAAGTTCACATTTCTTCCAGCTGAAATGAAGTGGCTACAATGGCAAGGATGTCCTTTTAGAATCCTGCCTTCTGACTTTTGGTCTCAGAAATTCACTGTCCTTGATCTCTCACACAGCAACGTAGAAAGCTTATGGGGCTGCCGCTGGGGAAGCAAAAAGGTGCCAAAGAATTTGAAGGTCCTGAACCTCTCCCATTGTTATAATCTGACTTCTATTCCTGATTTATCTGGATGTACAAGTTTAGACAAGATTGTGCTCGAGAGATGCCTTGCTCTAACAAGTATTCATGAGTCAACTGGGAGTCTAAATGCATTGCGTGACTTGAATTTGAGCCAGTGTTCAAACCTTGAGGAGCTACCTAATGATGTCTCCGGGCTGAAAAATCTTGAGAACCTGTTGCTCTCTGGCTGCTCAAAATTGAAAGCCTTGCCAGCGAACATAGGCTACCTGATGTCACTGAGAAAGCTACTTCTTGATGGCACTGCCATTGACAAGCTACCTGAGTCAATCTTCAGCCTGGAGAAACTAGAACATCTTATTTTAGATGGTTGCAAAAATTTGAAAAGGCTACCAAATTGTATTGGAAACTTGACTTCTCTGCTAGAACTCTCCCTTTATCAGTCTGCATTAGAAGAACTACCCGATTCTGTTGGATCACTGGCAAGCCTTGAGATACTCCATTTGATATGGTGTCAATCTCTCACTGCAATTCCTGAATCCATTGGCAATCTCAAATCATTGACAACACTTTCAGTTTATGGTAGTCCAATCAGAGAACTCCCTTCTTCTATTGGTTCATTGTTATCTTTGAAGAAGCTATCAGCTGGAAAATGTGAGCTTCTTAGTAAATTGCCTGATTCAATTAATGGCTTAGCTTCCATAGTTGAGCTTCAGTTAGATGATACAGTCATTGAAAATTTACCAAATCAGATTGGATCTATGATATCACTAAGAAAGCTTGAAATGAGGAATTGTAGTAATCTTAAATCATTACCAGAATCTATTGGCAGCCTAGCACAATTAACTACTTTAGACATACGCAATTCGAATATTGAGGAACTGCCAGAGTCCATTGGCTTGTTGGAAAATCTTGTCGCGTTAACTTTGAACAAATGCAAAATGCTCAGACAGCTTCCAACATCTATAGGAAAGTTGAAGATGCTGCATCGCTTGAAGATGGAAGAAACATCTCTCACAGACTTGCCTGAAACGTTTGGTTCACTCTCAAGTTTGATGACATTGGAAATGTCTAATAGGCCATATTCAATTGCAAATGGTGGTGATGGCTTGCCTGCAGGGGCAGAAACTGCTCATTCTTTCCAATTCCCAACTTCTTTCTATGATCTGACTTTGCTATATCTTTTGGATGCCTGCGCTTGGAGAATATCAGGGAAAATTCCTGATGATTTTGAGAAATTGTCATCATTAGAGACATTGGATTTGTCTCAAAATAATTTTCATAGCCTTCCTTCCAGCTTGAAGGGCCTCTCAATTCTCAAAACACTTTCACTTCGAAGCTGCAGTGAGCTCATATCTCTCCCTTCACTTCCTTCAAGCTTGATAAAGCTGAATGCCGAAAACTGCACCGCTCTGGAAAGCGTATCTGAACTCACAAACTTGGAAAGCTTACAAGAGCTGGACCTCACAAACTGTGCAAAGTTAGTGGATATTCCAGGGCTTGAATGCTTGAAGTCTTTGAGGTGGTTGTTCCTTAGTGATTGCATTGGATGCTCCTCTCAAGTGAGGAAAAGATTTTCAAAGTTCACATTAAGGAATTTATCGAACTTGAGTATGCCAGGAAGCAGGTTCCCAGAATGGTTTTCAGGACAAACAGTGAACTTTACCAAGCACATAAACCGTGAGCTTAAAGGTGTTGTTGTATGTGTTGTTCTTTCTATCAACCATGATATACCTAATGATGATATGGTGCCTCGAGTGATTGATGTCGAGGCACGTGTTCTTAAATCGGACAAACAAGTTTATAGTACTACATTATACATAGGTGGGGTGCCAAAGACAAACCATGAACACATACACTTGTGTCGGTTTGGAGATTTTCATCAATTGGTCCATTTTTTGAAAGATGGTGGCACCTTATGTGTGGCCATGGGAAACCCTGTCGTTGATAAGAGATTGGAGCTGAAAAATTCGGGGATTCATTTGATTTTTGAAGGGGATGATGATTATGGTGGAGATGAAAATTATGTGGACCAAAGTCTGAAATCGGTCTCAGAAAAAATGGCCGAGTTTTTCAACTCTTTAGAAGATAATTTGTGA 4086 0.4295 MSTEISSTPGAFRLRWDVFLSFRGPDTRHSFIEPLYNALHSRGVRVFRDDEGLEGGDDIAHSLLEAIDDSAAAIVVLSPNYASSRWCLEELVKICDCGRLILPVFYKVNPHQVGSQKGPFDEAFKINEEKFERNMVLRWREAMRKVGKRSGFPLPDKSSAEDQANLIRRLAEKVARELRNTPLGVGQFTVGLDHRVEELANLLEVKSNGFRVLGLYGMGGVGKTTLAKTLFNNLVAHFEHRTFIPNVREASSKDDGLVSLQKKIIGELTDRSRAVHISHIPAGVASIRRTVQENRVLIVLDDVDNVNQLDSLIGKKEWFYEGSRVIITTRDIQVLIDHNADLRYPVRELGSDDALELFSYHALRRKKPTDEFLSLSKRIVKLTGGLPLALEVFGSFLFDKRRVEEWVDALDKLGRIRPQHLQDVLRISYDGLDQEERTIFLDIACLLVQMEMKRDDVIDVMRGCGFSAEVTITVLTARSLIKIAEDDNTVVMHDQIRDMGRQIVRDESPGDPGMRSRLWNRAEILTVLQGNKGTRSTQGITLDFKVKINSGHNLRQQMSILELLPFLKPSLTEEEKEVTLQTKSFESMMNLRLLQINNMRLQGKFTFLPAEMKWLQWQGCPFRILPSDFWSQKFTVLDLSHSNVESLWGCRWGSKKVPKNLKVLNLSHCYNLTSIPDLSGCTSLDKIVLERCLALTSIHESTGSLNALRDLNLSQCSNLEELPNDVSGLKNLENLLLSGCSKLKALPANIGYLMSLRKLLLDGTAIDKLPESIFSLEKLEHLILDGCKNLKRLPNCIGNLTSLLELSLYQSALEELPDSVGSLASLEILHLIWCQSLTAIPESIGNLKSLTTLSVYGSPIRELPSSIGSLLSLKKLSAGKCELLSKLPDSINGLASIVELQLDDTVIENLPNQIGSMISLRKLEMRNCSNLKSLPESIGSLAQLTTLDIRNSNIEELPESIGLLENLVALTLNKCKMLRQLPTSIGKLKMLHRLKMEETSLTDLPETFGSLSSLMTLEMSNRPYSIANGGDGLPAGAETAHSFQFPTSFYDLTLLYLLDACAWRISGKIPDDFEKLSSLETLDLSQNNFHSLPSSLKGLSILKTLSLRSCSELISLPSLPSSLIKLNAENCTALESVSELTNLESLQELDLTNCAKLVDIPGLECLKSLRWLFLSDCIGCSSQVRKRFSKFTLRNLSNLSMPGSRFPEWFSGQTVNFTKHINRELKGVVVCVVLSINHDIPNDDMVPRVIDVEARVLKSDKQVYSTTLYIGGVPKTNHEHIHLCRFGDFHQLVHFLKDGGTLCVAMGNPVVDKRLELKNSGIHLIFEGDDDYGGDENYVDQSLKSVSEKMAEFFNSLEDNL* 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1548 1361 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1315 IPR044974 GO:0006952
Dod02g1548 1361 Pfam TIR domain 16 181 IPR000157 GO:0007165
Dod02g1548 1361 Gene3D Ribonuclease Inhibitor 1038 1225 IPR032675 -
Dod02g1548 1361 Gene3D Ribonuclease Inhibitor 747 936 IPR032675 -
Dod02g1548 1361 Gene3D Ribonuclease Inhibitor 556 746 IPR032675 -
Dod02g1548 1361 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 1315 - -
Dod02g1548 1361 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 152 IPR035897 -
Dod02g1548 1361 ProSiteProfiles TIR domain profile. 14 178 IPR000157 GO:0007165
Dod02g1548 1361 ProSiteProfiles Leucine-rich repeat profile. 660 682 IPR001611 GO:0005515
Dod02g1548 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 443 IPR027417 -
Dod02g1548 1361 Pfam NB-ARC domain 195 416 IPR002182 GO:0043531
Dod02g1548 1361 ProSiteProfiles Leucine-rich repeat profile. 1078 1100 IPR001611 GO:0005515
Dod02g1548 1361 ProSiteProfiles Leucine-rich repeat profile. 1145 1167 IPR001611 GO:0005515
Dod02g1548 1361 Gene3D Ribonuclease Inhibitor 937 1033 IPR032675 -
Dod02g1548 1361 Gene3D - 348 433 IPR042197 -
Dod02g1548 1361 Gene3D - 12 182 IPR035897 -
Dod02g1548 1361 SMART till_3 15 149 IPR000157 GO:0007165
Dod02g1548 1361 SMART LRR_bac_2 941 960 - -
Dod02g1548 1361 SMART LRR_bac_2 1076 1095 - -
Dod02g1548 1361 SMART LRR_bac_2 658 678 - -
Dod02g1548 1361 SMART LRR_bac_2 1120 1140 - -
Dod02g1548 1361 SMART LRR_bac_2 847 866 - -
Dod02g1548 1361 SMART LRR_typ_2 941 964 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 1076 1098 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 847 870 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 753 776 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 705 729 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 894 917 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 800 823 IPR003591 -
Dod02g1548 1361 SMART LRR_typ_2 988 1010 IPR003591 -
Dod02g1548 1361 Gene3D - 183 341 IPR027417 -
Dod02g1548 1361 SUPERFAMILY L domain-like 491 908 - -
Dod02g1548 1361 PRINTS Disease resistance protein signature 212 227 - -
Dod02g1548 1361 PRINTS Disease resistance protein signature 383 397 - -
Dod02g1548 1361 PRINTS Disease resistance protein signature 290 304 - -
Dod02g1548 1361 PRINTS Disease resistance protein signature 703 719 - -
Dod02g1548 1361 SUPERFAMILY L domain-like 884 1206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1548 Dod-Chr2 18795136 18802570 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1548 723 994 WRKY Transcription Factor Family AT4G12020 31.944 2.27e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1548 - - lang:109340539 1578.92