Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1530 ATGGCTCTGAAGAACATGATGCTTCTTCTGAGCCTTCTCTTTGTTTTACACAGTTTTTTTATACCAACCTGCTATTGCCAATCTAATTCTCCTCAGAACATTGAAACTTTCTATCCAAATGAAACTCTAGAACAAGCCCTCACAACACAACCTCCTGAGACACCAATAAATCCACAAGCATCACCACCACAATCAACAGTGGCAGCATCAAAAAGTTCGTCATCAAACAGTAAGGTAGCAAAGGCTGTTGCTGCAACAGCAGCAAGCACTCTAGTTGTTTGTGGCATAGTTTTCTTTTTGGCTCTAAGGTGCTTCAGAGCAAGGAGGAAAAAGGAGGTAACCAACACTGCTTCTGCAGCAGATACTAGGCCTGTTGTGCCTCCTATGAGCGTGTTCGAGCGAATTGACGGAAACATCAAGGGACTGATTGTTGATGAGGATGGTTTGGATGTGATATACTGGAAAAGGCTTCAAGAAGGTAAGAACATAGATAAGGATTTCAAAAAGGAGGTCTTGAGTAGTCCCGAAATCAAACAAGAAGATGATCATGAAGGGTATCAAAGGAAAAAACACGAGTCCATCCAAGGAGTACCTCTACTTAGAGGGTTATCTTCAACTTCCCATTTGAATATATTTCCAGAAGAACCATACACAATTATGAGAATTCTACCTCCTGCTCCTCCTCCCATTTTGCCTGCATCAGGTGGAGCTGATATCAGTAGTGTTCAGAAACTAGACTTCCCTACTCAACCATTTGCTCCACCCTCTCCACATTCAACACCTAAACCACCCTCAACTTCTTTATCATCAATTCCAAAAGTGACTAGTCCGGCACCCCAACAACAACAACTAAGTATTCTCCCACTAGGTGGAGTCGGTTACATAGACCGGACGACCTCCAACAATCACCCAGATAAAAAGAGTCTAGCACCAGCACCACCTCTCCCTCCAACAATCCTAAATAGAAAGAGTTCAGCACCAACACCACCTCCTCCTCCACCAATCCCAAATAGTCTAGCATCAGCACCACCTGCCCCTTCACCAATCCTAGATAAAAAGAGTCTAGCACCAGCACCACCTCCCCCTCCAACAATCCTAGATAGAAAGAGTTCAGCACCAGCTCCACCTCCTCCTCCACCAATCCCAGATAAAAAGAGCCAAACCCCACCACCACCTCCTCCCCCAATTCCTGCTAGAAAGAGTCCAACACCTCCTCCTCCACCAAAAAAGGCCGGTAACTTGAAGTCATCATCAAAACCACCACCTACCCCTACTGAAACGCCGGGTAAAAAAGTAAAATCTTCGGCTGAAGAAATGCCAGAAACCGGCAATGGTCAGGTGAAACTGAAACCTTTGCATTGGGATAAAGTGAATACTAATCTTGATCACTCGATGGTGTGGGACAAAATTGACCGTGGCTCCTTCAGGGTTGATCATGAGCTTATGGAAGCTCTCTTTGGATATGTTTCCATAAACCGAGATACGCCAAAAGCAAATAATTCAGCAAGTCCAAGTAGGGATGCCTCGGCTCCATCAACAAAAGCTACCCTTCTTGACCCAAGAAAATCACAGAACACTGCCATTGTTTTGAAGTCTTTGGCAATCTCAAGAAAAGAAGTAATTGATGCACTCCTTGATGGCCAAGGCCTTAACACAGATACCATTGAAAAGCTTGCAAGAGTTGCTCCAACAGAAGAAGAGCAATCTCTCATACTTGAATACAAAGGAGACCCATCAAAACTTCCAGCAGCTGAATCTTTCCTTTTTCACATCCTTAAAGCTGTTCCTTCAGCATTCAAGCGCCTGAATGCCATGCTATTCAGGTTGAACTATGACACTGAGGTCTTAGAAATCAAGGAGTTTCTTCAGACCCTTGAGTTGGGGTGTAAGGAGCTTCGGAACCAAGGAGTGTTCCTGAAGCTTCTTGAAGCAGTGCTTAAGGCTGGAAACCGTATGAATGCAGGTACTCACAGAGGTAATGCTCAAGCATTCAACTTGGCTTCTCTAAGGAAGCTATCTGATGTCAAAAGCACCGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTGGTCCGTTCTGAAGGCAAACGTGCCGTTCTTAACCGCAACTACAGCATGAGCCGTAGTAGCAGCAGAAGCAGAAGCAGAAGCAGTAGCAGTGGGAGCATCGACACCAGTGAAAACTCTGAGAATTCTGCTGTTTCAGATGAACAAAGACAAAGGGAATATATAACACTCGGATTACCAATTGTGGGAGGGATTAGTTCTGAGTTCTCCAATGCAAACAAAGTAGCACTTATAGACTACTACAGTTTTGTTGGTTCAATCTCAGCACTATCAGCCAGGATAGTTGAGATTCAAGGAGTTGTTTCGCAGTGTGGAAATGATGAAGGGGGGAACTTTGCGAGAGAAATGAACCATTTTCTCGCAAGTGCTGAGGAGGAATTGAGATTGGTGAGGGAAGATCAGACAAGGGTAATGCAGCTTGTGAAGAGAACTACACAATATTATCAAGGAGGGGCTTGGAAAGATGGTGGAGAGCACCCTCTTCATCTGTTTGTCATTGTCAAGGATTTTCTTGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGGCCCCTAAAGGGTATTAG 2658 0.4443 MALKNMMLLLSLLFVLHSFFIPTCYCQSNSPQNIETFYPNETLEQALTTQPPETPINPQASPPQSTVAASKSSSSNSKVAKAVAATAASTLVVCGIVFFLALRCFRARRKKEVTNTASAADTRPVVPPMSVFERIDGNIKGLIVDEDGLDVIYWKRLQEGKNIDKDFKKEVLSSPEIKQEDDHEGYQRKKHESIQGVPLLRGLSSTSHLNIFPEEPYTIMRILPPAPPPILPASGGADISSVQKLDFPTQPFAPPSPHSTPKPPSTSLSSIPKVTSPAPQQQQLSILPLGGVGYIDRTTSNNHPDKKSLAPAPPLPPTILNRKSSAPTPPPPPPIPNSLASAPPAPSPILDKKSLAPAPPPPPTILDRKSSAPAPPPPPPIPDKKSQTPPPPPPPIPARKSPTPPPPPKKAGNLKSSSKPPPTPTETPGKKVKSSAEEMPETGNGQVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDHELMEALFGYVSINRDTPKANNSASPSRDASAPSTKATLLDPRKSQNTAIVLKSLAISRKEVIDALLDGQGLNTDTIEKLARVAPTEEEQSLILEYKGDPSKLPAAESFLFHILKAVPSAFKRLNAMLFRLNYDTEVLEIKEFLQTLELGCKELRNQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNYSMSRSSSRSRSRSSSSGSIDTSENSENSAVSDEQRQREYITLGLPIVGGISSEFSNANKVALIDYYSFVGSISALSARIVEIQGVVSQCGNDEGGNFAREMNHFLASAEEELRLVREDQTRVMQLVKRTTQYYQGGAWKDGGEHPLHLFVIVKDFLGMVDQACIEIARNMQKRKAPKGY* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1530 885 PANTHER FORMIN-LIKE PROTEIN 360 884 - -
Dod02g1530 885 MobiDBLite consensus disorder prediction 704 740 - -
Dod02g1530 885 MobiDBLite consensus disorder prediction 493 516 - -
Dod02g1530 885 MobiDBLite consensus disorder prediction 353 411 - -
Dod02g1530 885 MobiDBLite consensus disorder prediction 263 287 - -
Dod02g1530 885 PANTHER FORMIN-LIKE PROTEIN 1 286 - -
Dod02g1530 885 PRINTS Proline rich extensin signature 373 398 - -
Dod02g1530 885 PRINTS Proline rich extensin signature 344 360 - -
Dod02g1530 885 PRINTS Proline rich extensin signature 322 343 - -
Dod02g1530 885 PRINTS Proline rich extensin signature 249 261 - -
Dod02g1530 885 PRINTS Proline rich extensin signature 304 316 - -
Dod02g1530 885 SUPERFAMILY Formin homology 2 domain (FH2 domain) 514 880 - -
Dod02g1530 885 PANTHER FORMIN-RELATED 360 884 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod02g1530 885 PANTHER FORMIN-RELATED 1 286 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod02g1530 885 MobiDBLite consensus disorder prediction 704 735 - -
Dod02g1530 885 MobiDBLite consensus disorder prediction 246 451 - -
Dod02g1530 885 Gene3D Formin, FH2 domain 460 883 IPR042201 -
Dod02g1530 885 MobiDBLite consensus disorder prediction 49 72 - -
Dod02g1530 885 Pfam Formin Homology 2 Domain 444 865 IPR015425 -
Dod02g1530 885 SMART it6_source 439 880 IPR015425 -
Dod02g1530 885 MobiDBLite consensus disorder prediction 309 343 - -
Dod02g1530 885 ProSiteProfiles Formin homology-2 (FH2) domain profile. 439 885 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1530 Dod-Chr2 18550774 18553698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1530 409 881 FH2 protein (formin) Gene Family AT1G70140 56.540 3.61e-177 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1530 - - gmx:100780368 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1530 02 18550774 18553698 Dod02g1530 02 18550774 18553698 ECH