Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1529 ATGGAGACCAACGGCGTCGTTTCCGAAGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCGTCGATCGAAAGGTCATTGAGCGCTTGCTCAAAATCTCAGCTTGTAAAGTTACTGCAGTGGATAGTGGAATCAGAGCCCTGCAATTCCTTGGGTTGGACGAGCAGAGAAGGACCTCTGAATCAGATGGTTTTGTGCAGGGTTTAAAGGTGGATCTAATTATCACGGACTACTGCATGCCCGAAATGACTGGTTATGAGTTGCTCAAAAAAATCAAGGAATCATCCACTTTCAGAGAAATTCCAGTGGTCATTATGTCCTCTGAAAACATTTTGCCGCGCATAGACAGGTGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTGAAACGATTGAAGAATTACATGACCACCACCAGGGATGTTAGGGCCGGATGTCAAGACGGAAGTTGCGGCGATGAAGTCGCCGGAGGAGGAGGCGGCGGCGGCTGTGGTGGCGGCGGCGGCGGGGTTAATAAAAGGAAGCTGTCAGACACCTCCGATATGTCATCATCTCCACCGTCCATTTCCTCCTCATCAGCACCTTCATCATCGCCGTCTGATGATTCTTCACCTTCACAATCACCGTCATCGTCCCGTTCATCTTCACCCAGCGAGCTTGATTCTCCAATCAGACGGCTCAAGATGACTGGCGCCGATTGA 720 0.5028 METNGVVSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVQGLKVDLIITDYCMPEMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKNYMTTTRDVRAGCQDGSCGDEVAGGGGGGGCGGGGGGVNKRKLSDTSDMSSSPPSISSSSAPSSSPSDDSSPSQSPSSSRSSSPSELDSPIRRLKMTGAD* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1529 239 MobiDBLite consensus disorder prediction 182 227 - -
Dod02g1529 239 Gene3D - 11 154 - -
Dod02g1529 239 ProSiteProfiles Response regulatory domain profile. 12 143 IPR001789 GO:0000160
Dod02g1529 239 SMART REC_2 11 142 IPR001789 GO:0000160
Dod02g1529 239 SUPERFAMILY CheY-like 11 138 IPR011006 -
Dod02g1529 239 CDD REC_typeA_ARR 13 138 - -
Dod02g1529 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 238 IPR045279 GO:0009736
Dod02g1529 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 6 238 - -
Dod02g1529 239 MobiDBLite consensus disorder prediction 165 239 - -
Dod02g1529 239 Pfam Response regulator receiver domain 13 135 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1529 Dod-Chr2 18538612 18540056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1529 1 231 Response Regulator Gene Family AT1G59940 55.417 1.90e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod02g1529 Response_reg 1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1529 K14492 - gmx:100779833 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1529 02 18538612 18540056 Dod02g1529 02 18538612 18540056 ECH