Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1513 ATGGAAAAGGATGTGTGTGATCATCTTTCCCCAACATGGGATTGTGATAATGGCAATTCTGTGGAGAAGAGGCTCAGGCTATTTGGCTTTGAGCTGAATCCACCCTCAAACAATGAGGGATGTGTCAAAGAGTCTGCAGAAGGAGATGAAAGCGTGAACTCCTCCAACTCAGTTTCATCAGGAGGAGACAAAACTGCACAAGAGAGGAGCACAGCCAGAGAACCTGCAGATGATCAGAGAAAGTTTGAGTGCCAATACTGTTTCAAGGAATTTGCAAACTCACAAGCATTAGGGGGCCACCAGAATGCACACAAGAAAGAAAGAATGAAGAAGAAAAGATTGCAGATTCAAGCAAGGAAGGCTAGCATAAACTACTACCTACAGCCTTTTCAAAACAGCCATGGATTTGCTTACCATGGCTCTAATAATAATAATAATAATAGTACCACTCCTTGGTTCTATGACCCTTCTTCCTATAACTGCTCTGAGTTCACCTTGTGTGAAGAATCTCAGATTAGCTTCAATTCAAATGACCAAGATACCAATAACTTTATTGGTGATCAGAAATCAAATTGGTATTCTCTGCCATCCCACCATGCTCCTTCCCAACAAGATGCTTGCATGTTTACTTTCTCCAATAATACAGAAAATAGGCCTTTCATCTTCAAGCCTTGCAACTTCCCTGCTTCAAATCAAAGCCATAGTAAAGCTTTGGATCTTCAACTAGGCCTCAACTTGGAGTCAAATACAAGCTCTCTAAGAAGAGCCTAA 771 0.4137 MEKDVCDHLSPTWDCDNGNSVEKRLRLFGFELNPPSNNEGCVKESAEGDESVNSSNSVSSGGDKTAQERSTAREPADDQRKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQIQARKASINYYLQPFQNSHGFAYHGSNNNNNNSTTPWFYDPSSYNCSEFTLCEESQISFNSNDQDTNNFIGDQKSNWYSLPSHHAPSQQDACMFTFSNNTENRPFIFKPCNFPASNQSHSKALDLQLGLNLESNTSSLRRA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1513 256 MobiDBLite consensus disorder prediction 31 77 - -
Dod02g1513 256 SUPERFAMILY beta-beta-alpha zinc fingers 79 109 IPR036236 -
Dod02g1513 256 Gene3D Classic Zinc Finger 57 133 - -
Dod02g1513 256 MobiDBLite consensus disorder prediction 48 66 - -
Dod02g1513 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Dod02g1513 256 PANTHER ZINC FINGER PROTEIN 5 1 246 - -
Dod02g1513 256 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Dod02g1513 256 PANTHER ZINC FINGER PROTEIN 5 1 246 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1513 Dod-Chr2 18321587 18322514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1513 79 125 C2H2 Transcription Factor Family AT1G68360 68.750 1.95e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g1513 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1513 - - gmx:100799857 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1513 02 18321587 18322514 Dod02g1513 02 18321587 18322514 ECH