Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1490 ATGCCATTCGGTTTGGTCTCAGCCTGGAACAAGCGCCGTCGAAGCAAGTCTGAAGATAATACAAGCCCCTTTAGACACTCTATTCAGGGATTTACAAACCTGTGGAGCTTTGGCAACTTGAAGATCAGGTATCACGACCTACAAAACGGCTGCACTGGATCATCTGTTTTCACACTCAAGGAAATGCAAGAGGCAACATGTTCATTCAGTGATGAAAATCTGCTCGGAAAAGGAGGATTCGGCAAAGTCTACCGAGGCACTTTGCGGTCAGGAGAGGTTGTGGCAATCAAGAAAATGGAGATGCCAGCAATCAAAGAAGCAGAGGGGGAACGTGAGTTCCGTGTTGAAGTTGACATCTTAAGCAGACTCGACCACCCAAATCTCGTATCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCATAATGGGAACCTGCAAGATCATTTGAATGGTATGTCATGTACCCAGAATCCACACTCCTACCAAAATTTCTTAAATCATGCTTCCATTAATCTACACCTAATTTTAGGAATTGGGGAAAGGAAAATGGATTGGCCTCTAAGACTCAAGGTGGCATTGGGAGCTGCAAAAGGGCTTGCTTATCTCCACTCAGGTTTTGATGTTGGAATTCCCATTGTTCATAGAGATTTCAAATCGACCAATGTTCTCTTAAATGCCAACTTTGAAGCAAAGATATCAGACTTTGGCCTTGCCAAGTTAATGCCAGAAGGACAGGAGACACATGTGACAGCCAGAGTACTTGGTACCTTTGGCTATTTTGACCCTGAGTATACATCGACCGGGAAACTTACTCTACAAAGTGATGTTTATGCATTTGGTGTTGTTCTTCTGGAGCTTTTGACTGGACGCCGAGCTGTTGATCTAAACCACGGTCCAAATGATCAAAACCTCGTGCTACAGGTGAGGCATATACTGAATGATCGCAAGAAGCTGTGTAAGGTGATAGATCCGGAGATGGCTCGAAACTCTTATACCATTCAGTCTATAGTCATGTTTGCCAATCTAGCATCAAGATGTGTTCGAACCGAGAGTAATGAGAGACCTTCAATGGCGGAATGTGTAAAAGAACTCCTAACAATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATTTAG 1182 0.4281 MPFGLVSAWNKRRRSKSEDNTSPFRHSIQGFTNLWSFGNLKIRYHDLQNGCTGSSVFTLKEMQEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMEMPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGMSCTQNPHSYQNFLNHASINLHLILGIGERKMDWPLRLKVALGAAKGLAYLHSGFDVGIPIVHRDFKSTNVLLNANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNHGPNDQNLVLQVRHILNDRKKLCKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHSLRMI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1490 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Dod02g1490 393 ProSiteProfiles Protein kinase domain profile. 69 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1490 393 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Dod02g1490 393 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 161 - -
Dod02g1490 393 PANTHER OS01G0750732 PROTEIN 172 393 - -
Dod02g1490 393 PANTHER OS01G0750732 PROTEIN 1 161 - -
Dod02g1490 393 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 172 393 - -
Dod02g1490 393 PIRSF ILK 187 384 - -
Dod02g1490 393 PIRSF ILK 54 176 - -
Dod02g1490 393 Gene3D Phosphorylase Kinase; domain 1 39 147 - -
Dod02g1490 393 Pfam Protein kinase domain 70 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1490 393 Gene3D Transferase(Phosphotransferase) domain 1 148 382 - -
Dod02g1490 393 SUPERFAMILY Protein kinase-like (PK-like) 55 378 IPR011009 -
Dod02g1490 393 CDD STKc_IRAK 75 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1490 Dod-Chr2 17880560 17883595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1490 53 376 Receptor kinase-like Gene Family AT3G58690 44.753 1.21e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Dod02g1490 Pkinase 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1490 - - gmx:100796654 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1490 02 17880560 17883595 Dod02g1490 02 17880560 17883595 ECH