Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1481 ATGGTGCTATCACCAACACCCCAATTCTTTCTCCAGTATTCTTCTTCTTCTTCACTGCCTTATAGTTCTGACAACCAGAAACGATCATCTCCATCCTCAGATTCCTCATCTGGGAACAAAATAAGCCCTGCAATTCTCTTCATCATAGTCATATTAGCTGCTCTATTTTTCATCTTGGGCCTCCTTCACTTGCTTGTTAGGTTCCTCACAAAGCACAGGTCTTCTTCTTCATCAGTTTCTCAATCCAATAGGTACCCTGAATTGTCTGAATCTGATGCTTACCAGAGACAGTTGCAGCAGCTATTCCACCTTCATGACTCAGGCCTTGATCAGGCCTTCATTGATGCCCTCCCTTTGTTCCTCTACAAGGAGATAATAGGCTTGAAGGAGCCTTTTGACTGTGCTGTTTGCCTCTGTGAGTTCTTGGAACAAGACAAGCTGAGGTTGCTCCCCAATTGCAACCATGCTTTCCACATTGACTGCATTGACACATGGTTGCTTTCAAATTCAACTTGCCCTCTTTGTAGAGGGCCCCTTTATGTACCTGGATTTTCCTTTGAAACCCCATTTTTTGACTTTGAGGGTCCATTTGAGGAGGACGGGGTTTCAGCAAGTGGTGGTGGGGTTGGTGCTCTTTCTCCTAACAAGCCTGCAGAAAATCACATAATGAATGGTAAGAGGGTGTTTTCTGTTAGGCTTGGAAAGTATAGAAGCTCAAATAATGGAGATGAAGTGGAAAGAGGTGAAGGAGAGAGTAGTAGTTGTAGTAATGGTAATTTGGATGCAAGGAGATGCTATTCAATGGGGTCTTACCAATATGTTGTTGCTGATTCTGATTTGAAAGTGGCTTTGTGCCCCAGTAGAGGTGATGGCGGAATGAGTAGTAGTATGAGACAATTGAAGGAAAGAATAGCCACTAATGGGAATTCTTCCACTGATGGGGATATTGAGGGCAAAAAGATCAGCATTGCAGGGAAAGCTGATAGCTTTTCTGTTTCCAAGATCTGGCAATGGTCTAAGAAGGATAAGTTAACAAGTTCATCAGAGTCCCACTTCAACAATAATTCTACTCTCACTGCAAATTTGCAATGGATGAATAAGGCCAGAGGTACATGA 1116 0.4301 MVLSPTPQFFLQYSSSSSLPYSSDNQKRSSPSSDSSSGNKISPAILFIIVILAALFFILGLLHLLVRFLTKHRSSSSSVSQSNRYPELSESDAYQRQLQQLFHLHDSGLDQAFIDALPLFLYKEIIGLKEPFDCAVCLCEFLEQDKLRLLPNCNHAFHIDCIDTWLLSNSTCPLCRGPLYVPGFSFETPFFDFEGPFEEDGVSASGGGVGALSPNKPAENHIMNGKRVFSVRLGKYRSSNNGDEVERGEGESSSCSNGNLDARRCYSMGSYQYVVADSDLKVALCPSRGDGGMSSSMRQLKERIATNGNSSTDGDIEGKKISIAGKADSFSVSKIWQWSKKDKLTSSSESHFNNNSTLTANLQWMNKARGT* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1481 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 181 IPR013083 -
Dod02g1481 371 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 362 - -
Dod02g1481 371 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 13 362 - -
Dod02g1481 371 SUPERFAMILY RING/U-box 113 182 - -
Dod02g1481 371 MobiDBLite consensus disorder prediction 16 39 - -
Dod02g1481 371 SMART ring_2 134 175 IPR001841 -
Dod02g1481 371 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Dod02g1481 371 CDD RING-H2_PA-TM-RING 133 176 - -
Dod02g1481 371 Pfam Ring finger domain 133 176 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1481 Dod-Chr2 17683926 17685041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1481 30 348 C3H Transcription Factor Family AT2G18650 39.255 3.71e-57 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1481 - - gmx:100794750 435.647