Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1478 ATGGGTAGGCTTGAATCTGTGTTAAATCTTCATTCTACTTCTGCTAAATTGAAAGAGATTCAGGAAGAGTTTAAGGGTAAGAAGGTGATCCTTGGTGTTGATGACATGGATATTTTTAAGGGCATCAGTCTGAAGCTTCTAGCTGTGGAGCAGCTGCTGCAGCAGAATCCAGATTTGCAGGGCAAAGTTGTCCTAGTTCAGATTGTGAATCCTGCAAGGGGTTCAGGGAAAGATGTCCAGGAAGCAAAGAAAGAAACATATTTAATTGCTCAGAGGATCAACAATACTTATGGTTCAAACCATTATCAGCCAGTTGTACTCATTGACCGATATGTTCCTCGTTTTGAGAAGAGTGCCTACTATGCTGTAGCAGAATGCTGCATTGTTAATGCTGTGAGGGATGGCATGAACTTAGTCCCATACAAATATATTGTCTGTCGGCAAGGAACTGAACAACTGGACAAAACAATGGGTAGAACACCTGGTTCTCCACGGACGAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCTCCTTCTCTAAGTGGAGCTATCAGGGTCAATCCTTGGGACACTGATGCAGTGGCCGATGCTTTGAATTCAGCCATTACTCTGAATGATTCAGAGAAGAAATTGAGGCATGAGAAACACTACCGGTATGTCAGTTCTCATGATGTGGCATATTGGGCACGCAGCTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCACTATACCAAAAGGTGCTGGGTAATTGGTTTGGGCCTAGGGGTAAGAGTTATTTCACTTTCTCCTGGGTTTAGGAAGTTGTCCATTGACCACCTTGTTTCAGCTTACAAAAGAACAAGTAAGCGGGCCATATTTCTCGATTATGATGGTACTATGGTACCACAATCTTCTATGAATAAAATCCCAAGCCCGGAAGTCATATCTGTGCTAAATTCTCTGTGTAATGATACCAAAAACATTGTGTTCATTGTTAGTGGGAGGGGAAGAGATTCTCTAAATGAGTGGTTTACTTCTTGCAAAATGATTGGACTTGCGGCTGAACATGGCTACTTTGTAAGGTGGAATAAAGATTCTGAATGGGAAATCAGTCATTTGTCTGCCGATCTTGAATGGAAAAAGATTGTGGAGCCCATTATGCAGTCATATATAGAGGCAACTGATGGATCAAACATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCGAGATGCAGACCCTGATTTTGGCTCTTGCCAAGCCAAAGAATTGTTGAATCACTTGGAAAGCGTGCTTGCCAATGAACCTGCAGTTGTTAAAAGGGGCCAGCATATTGTTGAAGTTATGCCGCAGGGAATAAGCAAGGGTCTGGTAGCTGAAAAGGTTCTTTCAAGTATGGTTAATGGTGGTAATCCTCCAGATTTTATAATGTGCATTGGAGATGATATATCTGACGAAGACATGTTTGAGAGCATATCAAGGACAGTGGCAAGCCCATCATTGCCAGTAGCTCCAGAGATCTTTGCCTGCACTGTTGGCCGGAAGCCTAGCAAGGCTAAGTATTATCTTGATGATCCTGCTGATGTCATTAAGTTGCTGCAAGGCCTTGGTACTTCATCTAATCCAAAGCCCAGACATCTAGCTCAATTCCAGGTTTCTTTTGAGAGCACAGTTTGA 1665 0.4258 MGRLESVLNLHSTSAKLKEIQEEFKGKKVILGVDDMDIFKGISLKLLAVEQLLQQNPDLQGKVVLVQIVNPARGSGKDVQEAKKETYLIAQRINNTYGSNHYQPVVLIDRYVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTEQLDKTMGRTPGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDTDAVADALNSAITLNDSEKKLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWVIGLGLGVRVISLSPGFRKLSIDHLVSAYKRTSKRAIFLDYDGTMVPQSSMNKIPSPEVISVLNSLCNDTKNIVFIVSGRGRDSLNEWFTSCKMIGLAAEHGYFVRWNKDSEWEISHLSADLEWKKIVEPIMQSYIEATDGSNIEIKESALVWHHRDADPDFGSCQAKELLNHLESVLANEPAVVKRGQHIVEVMPQGISKGLVAEKVLSSMVNGGNPPDFIMCIGDDISDEDMFESISRTVASPSLPVAPEIFACTVGRKPSKAKYYLDDPADVIKLLQGLGTSSNPKPRHLAQFQVSFESTV* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1478 554 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 286 492 IPR006379 -
Dod02g1478 554 CDD HAD_TPP 286 527 - -
Dod02g1478 554 Gene3D Glycogen Phosphorylase B; 2 222 - -
Dod02g1478 554 TIGRFAM T6PP: trehalose-phosphatase 283 531 IPR003337 GO:0003824|GO:0005992
Dod02g1478 554 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 545 IPR001830 GO:0003824|GO:0005992
Dod02g1478 554 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 545 - -
Dod02g1478 554 Pfam Glycosyltransferase family 20 2 238 IPR001830 GO:0003824|GO:0005992
Dod02g1478 554 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 242 - -
Dod02g1478 554 SUPERFAMILY HAD-like 285 532 IPR036412 -
Dod02g1478 554 Pfam Trehalose-phosphatase 288 522 IPR003337 GO:0003824|GO:0005992
Dod02g1478 554 Gene3D - 413 544 IPR023214 -
Dod02g1478 554 Gene3D - 284 403 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1478 Dod-Chr2 17635939 17637851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1478 1 554 Trehalose Biosynthesis Gene Families AT1G23870 70.714 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1478 K16055 - gmx:100818536 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1478 02 17635939 17637851 Dod02g1478 02 17635939 17637851 ECH