Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1459 ATGTCTAAGGGTAACTCGTTATCGTTTGATTCAGACGAGGCTTCGCCGCCACCACCTCAGTTACCTCCGTCGCCTCCGTCACCGTCCGATGACCCAGAATCACTAAAAGATTCAAAAACTCGTTTGGCGCCTTCACCATCACCACCGGCTCCATCTCCGTCGCAGTCTCCACCGCCGCCATCGCCATCTGCGCCTGATTCTCCACCGCCTTCCCCGCCACCGTCTTCACCGCCGCCGCCATTGCCGTCTCCACCTCCGCCTTCTTCTCCACCTCCGGCAAGATCACCGCCACCTAAAGATCCTCCGACATCGCCTTCGGCGCCACCGCCACCGCCACCAGCACCACAGCCATCGCCACCAGCACCACAGCTATCGCGACCACCAGCACCAGCAACTCCACCCCAACCCGTTACCCCAATTCGAACTCCAACTCCACCTGCACCTTCAACTTCAACTCCATCTTCACCAGCTAATCCTCGGCCGTCGCCGCCAACTGGTTCGGTGCCAAGCCCGAGTGGCCCCCTTGCGCCGCCGCAGTCACCGCCAGTTTCCCCTGCCCCTCATTCAAGATCAAGTGGCACTCCTTCTGGAAGCCAGTCACCTTCACGAGATTCCGGTGGTAATAAAACAGGAGAATATGTTGGTTTTGCTCTCGCTGGGTTTTTCATCCTTGCCATCATTGGTTTAGTCATCTTTTTGGTTTTGAGGAAGAAGAAGAAGAAATACCGAGGGATCAATGAATTCTCCGCGCCACTCCCTAAAGGTGGAGATGCGCATTACTATGTAGACAAGCCTGGTGGTGTTGCCACTGCTCCACAAAGCGGGTTTTATGGTACACAGCCTTTACATTCTTCTCCTGGACCCTATGGAAATGTGAACCATCCAAGTAGCATGCGCCATTTGAGAACTCTTTCAGACCCAGGACATAATATGAGTGGCGGCCCCATAGCTTTCAGCTATGACAAGATTTTGGAGATAACCAACGGGTTTTCTAGTGAGAACGTGATAGGAGAAGGTGGATTTGGGTGTGTCTACAAGGCTGCCATGCCAGATGGCAGAGTGGGAGCAGTTAAGATGCTGAAAGCTGGTAGTGGGCAAGGAGAAAGGGAGTTCAGGGCTGAGGTGGAGATTATAAGCCGTGTCCATCATCGCCATTTGGTGTCATTGATTGGGTATTGCATTTCTGAGCAGCAGAGAGTGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAGTCAGCATTTGCATGGAGGTGATATGCCTGTTTTGGATTGGCCACAAAGGATGAAGATAGCAAATGGCGCCGCAAGGGGCCTGGCATATCTGCATGAGGGGTGCAACCCAAAGATTATTCATAGAGATATTAAGTCGGCAAACATTCTTTTGGATAATGCTTATGAAGCACAGGTTGCAGATTTTGGACTTGCCAGGCTAACCGATGATGCTAACACCCATGTATCAACTAGGGTGATGGGGACCTTCGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTTTCATTTGGAGTGGTCCTTCTTGAGCTCATAACTGGAAGGAAACCTGTTGATCCAACGCAGCCCGTAGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCGCTTCTCCTTCATGCAATTGAGACAGGTGACCTTGGTGATCTAGTAGACCGTAGGCTTGAACGGCACTACGTTGAAACTGAAGTGTTCAGAATGATTGAGGCAGCTGCAGCATGTGTTCGCCACTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTGGCAAGAGTCTTAGACTGTGGAGATCAAGTGTTAGATCTATCTAATGGGGTGAAATATGGTCAGAGCACTGTTTATGATTCTGGCCAGTATAATGAAGACATTATGAGATTCAGAAGGATGGCGAATGGCAGCTTTAGTGATTCTGATTTTGATTTGTACAGTAAAGAACACGGTTCAAGAGAGATGCCATCATGGATGCCAAGTAGTTCAGCTTCAGGTGGTAATCCACATTCTGGAGCTTTCCACAGCTATAGTAGCAGTATTGAGCACATTTCTTGA 2079 0.5022 MSKGNSLSFDSDEASPPPPQLPPSPPSPSDDPESLKDSKTRLAPSPSPPAPSPSQSPPPPSPSAPDSPPPSPPPSSPPPPLPSPPPPSSPPPARSPPPKDPPTSPSAPPPPPPAPQPSPPAPQLSRPPAPATPPQPVTPIRTPTPPAPSTSTPSSPANPRPSPPTGSVPSPSGPLAPPQSPPVSPAPHSRSSGTPSGSQSPSRDSGGNKTGEYVGFALAGFFILAIIGLVIFLVLRKKKKKYRGINEFSAPLPKGGDAHYYVDKPGGVATAPQSGFYGTQPLHSSPGPYGNVNHPSSMRHLRTLSDPGHNMSGGPIAFSYDKILEITNGFSSENVIGEGGFGCVYKAAMPDGRVGAVKMLKAGSGQGEREFRAEVEIISRVHHRHLVSLIGYCISEQQRVLIYEFVPNGNLSQHLHGGDMPVLDWPQRMKIANGAARGLAYLHEGCNPKIIHRDIKSANILLDNAYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPVGDESLVEWARPLLLHAIETGDLGDLVDRRLERHYVETEVFRMIEAAAACVRHSAPKRPRMVQVVARVLDCGDQVLDLSNGVKYGQSTVYDSGQYNEDIMRFRRMANGSFSDSDFDLYSKEHGSREMPSWMPSSSASGGNPHSGAFHSYSSSIEHIS* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1459 692 SMART serkin_6 330 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1459 692 Gene3D Transferase(Phosphotransferase) domain 1 406 615 - -
Dod02g1459 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Dod02g1459 692 MobiDBLite consensus disorder prediction 15 30 - -
Dod02g1459 692 SUPERFAMILY Protein kinase-like (PK-like) 312 602 IPR011009 -
Dod02g1459 692 MobiDBLite consensus disorder prediction 44 185 - -
Dod02g1459 692 ProSiteProfiles Protein kinase domain profile. 330 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g1459 692 PRINTS Proline rich extensin signature 49 65 - -
Dod02g1459 692 PRINTS Proline rich extensin signature 69 86 - -
Dod02g1459 692 PRINTS Proline rich extensin signature 16 28 - -
Dod02g1459 692 PRINTS Proline rich extensin signature 28 49 - -
Dod02g1459 692 CDD STKc_IRAK 336 603 - -
Dod02g1459 692 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 38 670 - -
Dod02g1459 692 MobiDBLite consensus disorder prediction 1 207 - -
Dod02g1459 692 MobiDBLite consensus disorder prediction 186 207 - -
Dod02g1459 692 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
Dod02g1459 692 PANTHER RECEPTOR-LIKE KINASE 38 670 - -
Dod02g1459 692 Pfam Protein tyrosine and serine/threonine kinase 333 600 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1459 Dod-Chr2 17361066 17365891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1459 177 657 Trihelix Transcription Factor Family AT1G70460 58.149 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod02g1459 PK_Tyr_Ser-Thr 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1459 - - lja:Lj2g3v1414850.1 696.427