Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1437 ATGGGCACCTCGTCCACATTCACCTTACTCTTGCTATCTGCTTTCTTGCTCTACCCATTCTTGGCTATCGCCCAAGAGGTGGCTAGGTCGGAAAGAGAAGCACTTGAGATTATCATAGGAGGAGGAGGAGGCTTCGGCTTTGGTCATGGCCATCCTCCATTACCCGGATGTCCCCCTCCACCGTCGCCACCTCCCCCTCCATCCCCGCCCCCACCTCGGCCACCGCCACCCCCTCCTCCATCCCCGCCCCCACCTAGGCCGCCGTCACCTCCCCCTCCATCCCCGCCGCCACCTCCCCCTCCATCCCCGCCCCCACCTCGGCCGCCGCCACCCCCTCCTCCATCCCCGCCCCCACCTAGGCCGCCGTCACCTCCCCCTCCATCCCCGCCCCCACCTAGGCCGCCGTCACCTCCCCCTCCATCCCCTCCCCCACCGCCGGCACTCTCGTTCCGGTTGCAGAGAGCACGCAGAGTGCTCCTAAAATTCAAGAGCCAAATCTGTGACCCAAAGGGGTATACTAGTAACTGGAAGGGAGGTGGAAGCCCATGTAATTACCGTGGGGTGCGATGTGCCACATATCCAAAACCGCCAAGGGTGTCAGCCGTGGCGGGATTAGATCTGAACCAAGCTGGCATCTCCGGTACTGCTGGGTGCGGAAGAGGAAGAGGAAGAGGTGGGCAGCGGCTGACGACGACGAGTATCTTGGGCGGCATTCCTGAGTTGACATTCTTCCACGTCAACTCCAACAACTTCAGCGGGATTCTCCCAAACCTTGCGGTCACCAACTTCGGCTATTTCTACGAGCTGGACCTCAGCAACAACAAGCTCACCGGCGAGTTCCCGATGCAAGTGCTTGAGGCTACGCGGCTGGTGTTCTTGGACCTGAGGTACAACCGTATCAGCGGTACAATTCCGCCGAAACTGTTCGAGTTGGACCTGGACGTCATTTTCATCAACAACAACGGCTTCACCGGGTGTCTCCCCGAAAACTTCGGGTCCACTCCGGCCAGGTACCTCACATTTGCAAACAACCAACTCACGTGTCCAATCCCCAGAAGCATCGGTCTAGCTTCCAAGACTCTCACGGAGGTTCTCTTCCTGGGCAACAAGCTTGACGGCTGCCTCCCCTTCGAGATTGGCTTCCTCAAGAAGGCCACGGTCTTTGATGCCAGCAGGAACCAGCTCACGGGTCCCATCCCCCACTCCTTCGGCTGCTTGGAAAAGATCCAGTTCCTCAATCTGGCGCACAACCAGTTGTACGGACATGTTCCGGAGTCGGTGTGCCTCCTCCCGGGAATCCGCAACAACGGCAACCTGTCCTTGTCGGACAACTACTTCACCCATGTTGGCCCAATATGCCTCCAGCTCATCCATTCCGGTGTGCTGGACCTACGCAACAACTGCATCCTGGGACTCGACAATCAAAGGTCACCGCAAGAGTGCGTTGAGTTTTTCTGGAGGGTGAAGCCCTGCCTAAACTACAAGTCTTTGATGAATTACATCCCTTGTCCAGCATTCTACTCGCACTTGCTGTCGAACTGGCATAGCGCCTTCGCCCCTCCTCAGACAACTGCCTCGTCCCCTGCCCCTGCGCCGCCGGTAACTTACGATGCTCTCAAACCTCATCGCTTGTGA 1635 0.5847 MGTSSTFTLLLLSAFLLYPFLAIAQEVARSEREALEIIIGGGGGFGFGHGHPPLPGCPPPPSPPPPPSPPPPRPPPPPPPSPPPPRPPSPPPPSPPPPPPPSPPPPRPPPPPPPSPPPPRPPSPPPPSPPPPRPPSPPPPSPPPPPALSFRLQRARRVLLKFKSQICDPKGYTSNWKGGGSPCNYRGVRCATYPKPPRVSAVAGLDLNQAGISGTAGCGRGRGRGGQRLTTTSILGGIPELTFFHVNSNNFSGILPNLAVTNFGYFYELDLSNNKLTGEFPMQVLEATRLVFLDLRYNRISGTIPPKLFELDLDVIFINNNGFTGCLPENFGSTPARYLTFANNQLTCPIPRSIGLASKTLTEVLFLGNKLDGCLPFEIGFLKKATVFDASRNQLTGPIPHSFGCLEKIQFLNLAHNQLYGHVPESVCLLPGIRNNGNLSLSDNYFTHVGPICLQLIHSGVLDLRNNCILGLDNQRSPQECVEFFWRVKPCLNYKSLMNYIPCPAFYSHLLSNWHSAFAPPQTTASSPAPAPPVTYDALKPHRL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1437 544 PANTHER BNAC05G26270D PROTEIN 14 541 - -
Dod02g1437 544 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 541 - -
Dod02g1437 544 MobiDBLite consensus disorder prediction 522 544 - -
Dod02g1437 544 SUPERFAMILY L domain-like 154 471 - -
Dod02g1437 544 MobiDBLite consensus disorder prediction 52 149 - -
Dod02g1437 544 Pfam Leucine rich repeat N-terminal domain 155 190 IPR013210 -
Dod02g1437 544 Gene3D Ribonuclease Inhibitor 337 497 IPR032675 -
Dod02g1437 544 MobiDBLite consensus disorder prediction 46 149 - -
Dod02g1437 544 PRINTS Proline rich extensin signature 58 70 - -
Dod02g1437 544 PRINTS Proline rich extensin signature 93 109 - -
Dod02g1437 544 PRINTS Proline rich extensin signature 72 93 - -
Dod02g1437 544 Gene3D Ribonuclease Inhibitor 153 336 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1437 Dod-Chr2 17150443 17152077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1437 146 487 Leucine-rich Repeat extension Gene Families AT4G13340 42.197 3.61e-74 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1437 - - ahf:112800345 504.982