Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1419 ATGCTACGCTTGTTGAGGCGGACAGCGGAGCACTGCTGTGGAGGGTGGGGCAGCGGCGACTCTCTTGTGTGGCACATCGGGCTCAAGCCTCACGCCGCCGGGGAGTTCTCGATGGCGGTGGCTCAAGCCAACTTGTCTCTGGAGGATCAGTGCCAAGTCTTCGCTTCCCCCTCCGCCACCTACATCGGCGTATACGACGGCCATGGTGGCCCCCAAGCTTCTCGATTTGTCAAAAACCATCTCTTCCCTTATTTGCACAAATTGGCGAGTGAGGAAGGGGGAGTGTCGGCGGAGGTGATAAGAAAGGCATTCAGTGCAACAGAGGAGGACTTCTTGCGTTTGGTGAAGAGCTCTTTGGCCGTAAGCCCCCAGATTGGTTGTGTAGGATCATGCTGCCTTGTTGGTGCAATTTCTAATGATGTCTTGTATGTTGCCAACCTTGGAGACTCCAGAGCAGTCCTTGGCAGGAGAAGCAGCAGCTCGGTGGTGGCAGAGCGCTTGTCAGTGGATCACAATGTTGGTGATGAGGAGGTCAGGAAAGAGGTTGAAGCCCTTCATCCTGATGATTCCCACATTGTCGTTCATACCCATGGCGTCTGGAGGATTAAGGGCATTATCCAGGTGTCAAGATCAATTGGTGATGTGTATCTCAAGAGACCTGATTTTTACAGAGACCCAGTTTTTCAGCGATTTGGAGCTCCCATTCCTTTGAATCGTCCAGTAATTTCTGCTGAACCCTCAATCATTATTAGGGAGCTTGAGCCAGAAGATATGTTCCTGATATTTGCATCAGATGGTCTTTGGGAACAACTGAGTGATGAAGCAGCAGTTGAGATTGTTTTCAAACATCCGAGAGCTGGAATTGCCAAGAGATTAGTGAGAGCTGCTCTTCAGGAAGCTGCTAAGAAAAAAGAGATGAGATATGATGACATAAAGAAAATCGACAAGGGAACAAGACGGCATTTTCACGATGATATCACTGTTGTTGTAATCTATCTTGATCACCACAAGGGCCCTTCCAATGGTAGATTCAAGCAGAGTGCTGTTGGCACTACAACTGCCCCTGTTGATATTTGCTCCCTAAATGAGGATGAAGCAGAACAGAGTATGCTCGGTACAGTTGCTTAA 1128 0.4911 MLRLLRRTAEHCCGGWGSGDSLVWHIGLKPHAAGEFSMAVAQANLSLEDQCQVFASPSATYIGVYDGHGGPQASRFVKNHLFPYLHKLASEEGGVSAEVIRKAFSATEEDFLRLVKSSLAVSPQIGCVGSCCLVGAISNDVLYVANLGDSRAVLGRRSSSSVVAERLSVDHNVGDEEVRKEVEALHPDDSHIVVHTHGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQRFGAPIPLNRPVISAEPSIIIRELEPEDMFLIFASDGLWEQLSDEAAVEIVFKHPRAGIAKRLVRAALQEAAKKKEMRYDDIKKIDKGTRRHFHDDITVVVIYLDHHKGPSNGRFKQSAVGTTTAPVDICSLNEDEAEQSMLGTVA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1419 375 ProSiteProfiles PPM-type phosphatase domain profile. 32 333 IPR001932 -
Dod02g1419 375 PANTHER ALPHABET, ISOFORM E-RELATED 5 370 - -
Dod02g1419 375 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 5 370 - -
Dod02g1419 375 SMART PP2C_4 29 331 IPR001932 -
Dod02g1419 375 Pfam Protein phosphatase 2C 35 302 IPR001932 -
Dod02g1419 375 CDD PP2Cc 36 333 IPR001932 -
Dod02g1419 375 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Dod02g1419 375 SUPERFAMILY PP2C-like 44 335 IPR036457 -
Dod02g1419 375 Gene3D - 28 339 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1419 Dod-Chr2 17001553 17004957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1419 17 339 PP2C-type Phosphatase Gene Family AT3G51370 55.917 1.45e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1419 - K01102 gmx:100812137 587.03