Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1413 ATGAGCTGCAATGGTTGCAGGGTTCTCCGAAAAGGTTGCAGCGAGGAGTGCATGCTGAGACAAAGCCTGCAGTGGATAGAGAATCCACAAGCACAGGGTCACGCCACAGTCTTCGTCGCCAAGTTCTTCGGCCGTGCCACCGTCATGTCTTTTCTTTCCTCGGTTCCCCCAAACCAAAGATCTGATATGTTTCGGTCACTGATGTATGAAGCGGTGGGACGTAGTATAAACCCAGTAAATGGAGCAGTGGGGCTGCTGTGGATGGGGAACTGGCACCTGTGCCAGATGGGGGTGGAGAAAGTTCTGCGAGGTGGGGCCTTGATTCCATTGCCACAGTTCTTCGATGGATTTGCCTTTGAATCTCAGCATCCTCATCAGCGATCAAGGATGCCTAAGAGAAGGGCTCCTGCTGCTTTCAACTTGGAGAATTTCCAAGCACACTCCGCTGACAGAGCCACCACACCCTCCGAGGAATCCCACACCACTACCTTGGCCAGTGTCGCAGGAGACTCTGCTTCTCAACCCAAGCTCCTTAGACTCTTCTTTTGA 549 0.5282 MSCNGCRVLRKGCSEECMLRQSLQWIENPQAQGHATVFVAKFFGRATVMSFLSSVPPNQRSDMFRSLMYEAVGRSINPVNGAVGLLWMGNWHLCQMGVEKVLRGGALIPLPQFFDGFAFESQHPHQRSRMPKRRAPAAFNLENFQAHSADRATTPSEESHTTTLASVAGDSASQPKLLRLFF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1413 182 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Dod02g1413 182 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Dod02g1413 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 182 - -
Dod02g1413 182 PANTHER LOB DOMAIN PROTEIN 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1413 Dod-Chr2 16959455 16960487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1413 1 119 AS2 family AT3G49940 68.908 6.56e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod02g1413 LOB 1.1e-25 No_clan