Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1412 ATGGCTTTAGAGGCTCTGAATTGTGGCAGCAAAGGAGGAAGCACGCCGCTGGGGTACGAACAAGAAGAGGAAGAGGCATGGGGTAAAAGGAGGCGTAGTTCGAAACGCCCCCGCGTGGAGACGATGATGAAGGCATCCACCACAGAGGAAGAGTACCTGGCTCTCTGCCTCATCATGCTCGCCAACAGCAACACTCGTCATCATCAGCCTCATCAACCACCACCATCATCTAAGCTGCAATCTAGCTCTAGCCATGATGATCAGAGTCACAGGTGCAGCGTCTGCAACAAAGCCTTTCCGTCTTACCAAGCACTTGGGGGACACAAGGCCAGCCACCGCAAGTACGACAACCCCCCCGCTCCCCCTCCAGCCCCCGCCGCAGGAAATAGAAGGGCGGCGCTGCACGAGTGCTCCATCTGCCACAAGGCTTTCCCGACGGGCCAGGCCCTCGGCGGCCACAAGCGATGCCACTACGAAGGCGGCGCCGCCTCCTCCTCCTCCTCTTCCAGCCACCGTTCCTTTGACTTAAATCTTCCCCCACCCCTCCCCCTCCCCGAACAAGAGGTCGAAAGCCCCTTATCCAACAAGAAGCCAGCTCCTTTGTTTTTCCGCGTAGCTTCCTCACACTCCTACTGA 636 0.5818 MALEALNCGSKGGSTPLGYEQEEEEAWGKRRRSSKRPRVETMMKASTTEEEYLALCLIMLANSNTRHHQPHQPPPSSKLQSSSSHDDQSHRCSVCNKAFPSYQALGGHKASHRKYDNPPAPPPAPAAGNRRAALHECSICHKAFPTGQALGGHKRCHYEGGAASSSSSSSHRSFDLNLPPPLPLPEQEVESPLSNKKPAPLFFRVASSHSY* 212
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1412 211 MobiDBLite consensus disorder prediction 65 89 - -
Dod02g1412 211 MobiDBLite consensus disorder prediction 161 175 - -
Dod02g1412 211 Gene3D Classic Zinc Finger 62 160 - -
Dod02g1412 211 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Dod02g1412 211 PANTHER ZINC FINGER PROTEIN ZAT10 1 202 - -
Dod02g1412 211 SMART c2h2final6 135 157 IPR013087 -
Dod02g1412 211 SMART c2h2final6 90 112 IPR013087 -
Dod02g1412 211 MobiDBLite consensus disorder prediction 106 129 - -
Dod02g1412 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Dod02g1412 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 157 IPR013087 -
Dod02g1412 211 ProSitePatterns Zinc finger C2H2 type domain signature. 137 157 IPR013087 -
Dod02g1412 211 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 202 IPR044653 GO:0003700
Dod02g1412 211 MobiDBLite consensus disorder prediction 158 199 - -
Dod02g1412 211 MobiDBLite consensus disorder prediction 65 91 - -
Dod02g1412 211 Pfam C2H2-type zinc finger 90 114 - -
Dod02g1412 211 Pfam C2H2-type zinc finger 135 158 - -
Dod02g1412 211 SUPERFAMILY beta-beta-alpha zinc fingers 89 157 IPR036236 -
Dod02g1412 211 MobiDBLite consensus disorder prediction 1 44 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1412 1 201 C2H2 Transcription Factor Family AT3G19580 40.377 8.35e-44 146
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g1412 zf-C2H2_6 5.6e-12 CL0361
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1412 - - twl:120008434 159.844