Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1411 ATGGCATCTACGGCGTCGGGGCGAGAGCTGTCGAACCCTCCGTCGGACGGCATCTCCAACCTTCGCTTCTCCAACCACAGCGATCACCTCCTCGTCTCCTCTTGGGATAAGACGGCGCGCTTGTACGACGCCAGCGCCAATGTCCTCAGAGGAGAGTTCATGCACGGCGGACCCGTCCTTGACTGCTGCTTCCACGACGACTCTTCCGGATTCAGTGCCTCCGCCGACAACACCGTTAGGCGGCTTGTCTTCAGCTCCAGTAAGGAGGATATTTTGGGAAGGCATGATGCACCTGTTCGCTGTGTCGAGTATTCCTATGCTGCAGGGCAATTGATTACTGGTAGTTGGGACAAAACCCTAAAATGTTGGGACCCTAGAGGTGCAAGTGGGCAAGAGCGCACTCTTGTTGGGACATATCCACAACCTGAGCGTGTTTACTCTTTATCTCTTGTTGGAAATCGGCTAGTTGTAGCAACAGCTGGAAGGCATGTTAATGTGTATGATTTGAGGAACATGTCTCAACCTGAGCAGCGAAGGGAATCTTCATTGAAATACCAAACCAGATGTGTGCGCTGTTACCCAAACGGGACAGGATATGCACTTAGTTCTGTTGAAGGGCGGGTTGCAATGGAATTCTTTGACCTCTCTGAGGCTAGCCAAGCAAAAAAATATGCTTTTAAGTGTCACAGAAAGTCTGAAGCTGGAAGGGATATTGTCTATCCTGTAAATGCCATGGCATTCCACCCCATATATGGTACATTTGCGACAGGAGGTTGTGATGGTTATGTTAACGTATGGGACGGAAACAACAAGAAGAGGCTGTACCAGTACTCAAAATATCCAACTAGCGTTGCTGCACTTTCATTTAGTAGAGATGGACGCCTCCTGGCTATTGCATCAAGCTACACATTTGAAGAGGGGCCTAAACCCCATGAACAAGATGCTATCTACGTTCGGAGTGTAAATGAGATAGAGGTCAAGCCAAAACCCAAAGTCTATGCCAATCCTCCAGCGTGA 1017 0.4926 MASTASGRELSNPPSDGISNLRFSNHSDHLLVSSWDKTARLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADNTVRRLVFSSSKEDILGRHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAMAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSVAALSFSRDGRLLAIASSYTFEEGPKPHEQDAIYVRSVNEIEVKPKPKVYANPPA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1411 338 Gene3D - 2 332 IPR015943 GO:0005515
Dod02g1411 338 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.2 5 333 - -
Dod02g1411 338 SMART WD40_4 132 168 IPR001680 GO:0005515
Dod02g1411 338 SMART WD40_4 3 43 IPR001680 GO:0005515
Dod02g1411 338 SMART WD40_4 85 124 IPR001680 GO:0005515
Dod02g1411 338 SMART WD40_4 46 83 IPR001680 GO:0005515
Dod02g1411 338 SMART WD40_4 219 267 IPR001680 GO:0005515
Dod02g1411 338 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 276 IPR001680 GO:0005515
Dod02g1411 338 SUPERFAMILY WD40 repeat-like 14 301 IPR036322 GO:0005515
Dod02g1411 338 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 92 124 - -
Dod02g1411 338 Pfam WD domain, G-beta repeat 16 43 IPR001680 GO:0005515
Dod02g1411 338 Pfam WD domain, G-beta repeat 92 124 IPR001680 GO:0005515
Dod02g1411 338 Pfam WD domain, G-beta repeat 226 267 IPR001680 GO:0005515
Dod02g1411 338 PANTHER MRNA EXPORT FACTOR AND BUB3 5 333 - -
Dod02g1411 338 ProSiteProfiles Trp-Asp (WD) repeats profile. 92 124 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1411 Dod-Chr2 16939232 16943103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1411 92 300 U-box Gene Family AT2G33340 25.352 2.40e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1411 K02180 - jre:108979744 665.996