Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1398 ATGCTGAGTGAGATAGTGAAACTAAATAACCGAGATATGGAAGCAGCAACAGCAACCATGACAGGTTGTCAGTTCTACTACTACTTGCCTACTCACAGCAAGTGCATCAAAATCTTTTGGGGCTTGAATCTTCTGCTGGCTTTATCCAACTTAGTTGCTGCATCAAATGCCATTGTTAAGAGCTTACCGGGCTTCCCCGGCAAGCTGCCTTTCCTACTTGAAACGGGGTACATTGGCGTAGGCGAAGTAGAAGAAGTTCAGCTATTTTATTACTTCATTGAGTCAGAGGGGCGGCCAGCAGATGATCCACTTGTGCTTTGGCTTTCTGCAGGCCCTGGTTGCTCAGCTCTGTCTGCTATCTTGTATGAAAATGGTCCAATAGGTTTCGATTACAAAAGGTCTAGTGGGGGGCGCAAACCAGTTTTAGTGTTGAACGATTACTCTTGGACTAAGATTGCCAGTATTATTTTCTTGGATGCACCTGTTGGCACTGGATTTTCATATGCAAAAACTTCATCAGGATACAACACTAGTGATACAAAATCCACTGCACACATTTATATGTTTCTGAGAAAGTGGCTTCTGGCTCACCCTAAGTTTCAGACCAATCCTGTCTACATTGCTGGTGATTCTTATAATGGAATCACAGTTCCAGTTATTGTCAAGAAAATTTCTGATGGTAAAAAAGCTGGAAACTTGCCACCAATCAATCTCAAAGGTTATGTTCTAGGGAACCCATTAACTGATATCAAATATGATATAAACTCAAGAGTTAAGTTTGCCCACAGAGTTGGGCTTCTATCACATGAACTCTATAAGGAAACTAAACTTCATTGTCAAGGAGAATATGTTCGGCCAAATAAAAGTGATTCTAGATGCATGGACCGTCTTGACATGGTCAATCTGTGCCTCAAAGAAATATACAGTCCCATGGTATTGGAACCAAAGTGTAGCGCTCTCTCTCCAAAGCCAAACAAGCTTAAATGGCGTTCAAGCAATGCTGGGGTTAATACCTCAAATGCACTCCTGTTGGAAGTTAATCCTATTAGGCGATGGTGCAGGGATTATAACTATTTGCTGGTACACATCTGGGCTAATGACAAAGAAGTACAAGAAGCTCTGCATGTTAGAAATGGAACCATAGAATGGTGGGACATGTGTAATAAAAGCTTATCATATGTTAGTGACATAATAAGTAGCGTTGATTATCACCGGAACTTTACCAGCGAAGACCTTAGAGCTATCATTTATAGTGGAGATCATGATCTGCTTGTTCCATATGTGGGCACCGAGGACTGGATACAATCTCTGAAATTGACTGTTTTTTCGGATGATGAGTGGAGGCCATGGTATCTCGATGGACAAGTTGCAGGTTACACGGAGACATACAAATGGAAAAAGTACAGCATAACATTTGCCACTGTAAAGGGAGGAGGTCACACAGCTCCAGAGTACAAGCCCAAGGAATGCTTTAACATGATTAGCAGGTGGTTTGCTTATTACTTTCTTTAG 1512 0.4167 MLSEIVKLNNRDMEAATATMTGCQFYYYLPTHSKCIKIFWGLNLLLALSNLVAASNAIVKSLPGFPGKLPFLLETGYIGVGEVEEVQLFYYFIESEGRPADDPLVLWLSAGPGCSALSAILYENGPIGFDYKRSSGGRKPVLVLNDYSWTKIASIIFLDAPVGTGFSYAKTSSGYNTSDTKSTAHIYMFLRKWLLAHPKFQTNPVYIAGDSYNGITVPVIVKKISDGKKAGNLPPINLKGYVLGNPLTDIKYDINSRVKFAHRVGLLSHELYKETKLHCQGEYVRPNKSDSRCMDRLDMVNLCLKEIYSPMVLEPKCSALSPKPNKLKWRSSNAGVNTSNALLLEVNPIRRWCRDYNYLLVHIWANDKEVQEALHVRNGTIEWWDMCNKSLSYVSDIISSVDYHRNFTSEDLRAIIYSGDHDLLVPYVGTEDWIQSLKLTVFSDDEWRPWYLDGQVAGYTETYKWKKYSITFATVKGGGHTAPEYKPKECFNMISRWFAYYFL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1398 503 Pfam Serine carboxypeptidase 63 498 IPR001563 GO:0004185|GO:0006508
Dod02g1398 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Dod02g1398 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 157 IPR001563 GO:0004185|GO:0006508
Dod02g1398 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 168 IPR001563 GO:0004185|GO:0006508
Dod02g1398 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 193 218 IPR001563 GO:0004185|GO:0006508
Dod02g1398 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 502 IPR001563 GO:0004185|GO:0006508
Dod02g1398 503 SUPERFAMILY alpha/beta-Hydrolases 59 499 IPR029058 -
Dod02g1398 503 Gene3D alpha/beta hydrolase 67 501 IPR029058 -
Dod02g1398 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 470 487 IPR033124 GO:0004185
Dod02g1398 503 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 35 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1398 Dod-Chr2 16819547 16823524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1398 364 499 Calmodulin-binding Proteins AT2G22960 52.206 6.91e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1398 K16296 - jre:108983123 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1398 02 16819547 16823524 Dod02g1398 02 16819547 16823524 ECH