Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1370 ATGGCTACCGAACAACCCCTTCTAGACAAGCCCAGAAAATCCCGTTCCAAGACACTCTGGTTAATCCTCACAATAGTTGCCATCATAAGTTCCTCAGCCTTTGTTGCTTATCACGTCATCAAACCCTCCTCCTTCTTCAACCTCTCCTCCTCGTCTGTCAATGTCGTCTGTGAACATGCCCTTGACAAAGCATCATGCTTAGCCCATGTCTCTGAAGTAGCTCAAGGCCCCTTCTTGGCCACCACCAAAGACCAAATCTTCACTTTGCTCCAGTCTGTCCTAATGAAGTCCACCTCACACATCCAAAATGCCATGGACACAGCCAGCGCTATTAGACTCCGGCTTAACAGCCCCAGAGAGGAAGCAGCTTTGCGGGTGTGTGAGGAGCTGATGGACTTGTCCAAGGACAGGGTCTTTGACTCAATGGTGGCTCTAACAAAAAGGACCACTCATTCGCTGCAAGATGCACACATATGGCTGAGCGGCGTGCTCACTAACCATGCAACTTGCTTGGATGAATTAGAGGGGTCTGCTCGTGCCCTTATGGAGCCTGAACTCGAGGACCTGATATCAAGGTCAAGAACCTCCTTGGCCATGCTTGTTGCAGTGTTGCCTCAAAAGAGCAGTGAGCAACTCATTGAGGAGCCACTGAATGGGAACTTTCCCTCATGGGTGACACTCAGCGATGGGATTCTGTTGGAGGCTAAGGCTTCCGATATAGAGGCGAATGCTGTGGTGGCTAATGATGGGAGTGGCAAGTTCAAGACTGTAGCAGAGGCTGTTGCATCCGCACCCGACAATAGTAACACAAGGTATGTTATATATGTGAAGAAGGGAGAGTACAAGGAGAATGTTGAAATTGGCAGTACGAAGAAGAACGTGATGCTGGTGGGTGATGGTATGGATCAAACAATAATCACCGGCAGCTTGAATTGTGCGGATGGAACTGGCACCTTTAAGACCGCCACCGTTGCTGTTGATGGTGATGGGTTTATAGGGCAAGACATATGTTTCAAGAATACAGCAGGCCCAGAGAAGTACCAGGCCGTGGCACTGCGCGTGAGTGCAGACCAGTCCGTGATAAACAGGTGCCGCATTGAAGCCTTCCAGGACACTCTTTACGCCCACACTCACAGGCAGTTCTACCGTGACTCCGTCATCACCGGCACCGTTGACTTCATCTTTGGAGATGCAGCTGTTGTTTTCCAGCAGTGCAACCTAACAGCCCGAAAGCCCATGGCGAATCAGAGAAATATGGTCACGGCCCAAGGACGATACGAACCAAACTCGCCCACTGGGACTTCCATTCAGCAATGTCAACTAACAGCAAGTTGGGATCTTAAGCCCGTCGTGGGCTCCATCAAAACATATCTGGGCCGCCCATGGAAGAATTTCTCAAGAACCGTTGTGATGCAGTCCACGTTAGAGAGCCACATTGACCCAGCTGGATGGGCTGAATGGGATGATGAGCATAAGAACTATTCGCAAACATTGTATTATGGAGAGTACATGAACAGTGGGCCCGGTGCAGGTACCAGCAAGAGGGTGAATTGGTCTGGTTACCACATCATCACGAGTGCCTCGGAGGCTAGCAAGTTCACAGTAGCACAGCTCATCCAAGGTGATGTTTGGTTGAAGAACACTGGGGTGAACTTCATTGCAGGCCTCTAG 1671 0.5021 MATEQPLLDKPRKSRSKTLWLILTIVAIISSSAFVAYHVIKPSSFFNLSSSSVNVVCEHALDKASCLAHVSEVAQGPFLATTKDQIFTLLQSVLMKSTSHIQNAMDTASAIRLRLNSPREEAALRVCEELMDLSKDRVFDSMVALTKRTTHSLQDAHIWLSGVLTNHATCLDELEGSARALMEPELEDLISRSRTSLAMLVAVLPQKSSEQLIEEPLNGNFPSWVTLSDGILLEAKASDIEANAVVANDGSGKFKTVAEAVASAPDNSNTRYVIYVKKGEYKENVEIGSTKKNVMLVGDGMDQTIITGSLNCADGTGTFKTATVAVDGDGFIGQDICFKNTAGPEKYQAVALRVSADQSVINRCRIEAFQDTLYAHTHRQFYRDSVITGTVDFIFGDAAVVFQQCNLTARKPMANQRNMVTAQGRYEPNSPTGTSIQQCQLTASWDLKPVVGSIKTYLGRPWKNFSRTVVMQSTLESHIDPAGWAEWDDEHKNYSQTLYYGEYMNSGPGAGTSKRVNWSGYHIITSASEASKFTVAQLIQGDVWLKNTGVNFIAGL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1370 556 Pfam Pectinesterase 243 542 IPR000070 GO:0030599|GO:0042545
Dod02g1370 556 SUPERFAMILY Pectin lyase-like 241 555 IPR011050 -
Dod02g1370 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 204 IPR035513 -
Dod02g1370 556 PANTHER PECTINESTERASE 23 554 - -
Dod02g1370 556 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 179 IPR006501 GO:0004857
Dod02g1370 556 Gene3D - 237 556 IPR012334 -
Dod02g1370 556 CDD PMEI-like_4 65 203 - -
Dod02g1370 556 PANTHER PECTINESTERASE 23 554 - -
Dod02g1370 556 SMART PMEI_2 48 199 IPR006501 GO:0004857
Dod02g1370 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 198 IPR035513 -
Dod02g1370 556 Pfam Plant invertase/pectin methylesterase inhibitor 52 187 IPR006501 GO:0004857
Dod02g1370 556 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1370 Dod-Chr2 16493282 16495533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1370 3 552 Carbohydrate Esterase AT1G11580 54.659 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1370 K01051 - gmx:100815836 802.742